Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5865 ATGCCTATCGACACTCCTCTACTAGATAACAGTATCAACAACTCTTCTGGTGTTGCTGATCATGAGGAAGAGAAGCCACTGAAAATTGTTCACAAATTTGGGGCGGAATCGAAGAAGCTATGGAAAATAGCTGGTCCAACAATCTTAACAGCTTTATCTCAGTTCTCACTTGGTGCATTCACTTCTACGTTTGTTGGCCATGTCAACGAGCTCGATCTTGCAGCATTTTCCGTTGAAAATTCTGTTATTGCTGGATTCGCCTTTGGTTTCTTGTTGGGTATGGGAAGTGCGTTGGAGACACTATGTGGGCAAGCATTTGGTGCTGGTCATCTAAGGATGATGGGAATTTACATGCAAAGATCATGGATTATTTTGGTGGCTACTGCCCTTTTGTTGTTACCTTTTTATATTTGGGCAACTCCCCTCTTGAAGCTCGTTGGACAAACTGATGAGGTCGCAGAAGCTGCTGGCACATTTGCTTTGTGGATGATACCACAAATATTTGCATATGCTTTGAACTTTCCAGTCCAAAAGTTCTTACAAGCACAAAGGAAAGTCATGGTGATGTTATTGATATCAGTAGCTGTTTTGGTGTTACATATACCTCTTAGTTGGTTTCTAATATTGAAACTTAAATGGGGTTTAGTTGGAGCTGCAATTACTCTCAACACGTCATGGTGGTTGATTGTCATTGGTCAAACTTCGTATGTTATCATCACCAAATCAGATGGTGCTTGGAGTGGATTCTCATGGCTAGCATTTGCAGATTTGTTTAGTTTTGTGAAACTTTCTTTATCTTCAGCTGTTATGTTATGCTTGGAGTTTTGGTACTTGATGGTATTGGTGGTGGTAACAGGGCATTTAGCAAACCCTCTGGTGCCTTTGGATGCTGTATCTATTTGTATGAACATAAACGGTTGGGATATGATGATCGCGTTAGGGTTTAACGCTGCAATAAGTGTGAGAGTATCAAATGAACTTGGGGCAGGTGATTTTCGAGCTGCAAAGTTCTCAGTGATAGTGGTTTCCCTCACATCAATATCCATTGGTGTTGTTGCCATGATCATAGTACTAACAACAAGAGATTACTTTCCTCAATTGTTTACTTCAAGTGATGATGTTGCCAAGGCAACAACTAAACTTGCTGCTTTGCTTAGTGTCACAGTACTTCTAAACAGCCTTCAACCAGTCTTGTCTGGTGTTGCTATTGGAGCTGGTTGGCAAGCTCTTGTTGCATACATCAATCTTGGATGCTACTATATTGTTGGATTACCAGCAGGGATATTGTTGGGCTTTACATTTGGTTTTGGAGCAGAGGGTATTTGGTCAGGTCTCATTGGAGGCATAACCATGCAAACCATAATCCTTATAATTATTACTTCACTAACCAATTGGAAAAAAGAGGCTGATCAAGCAGATAGCCGTGTGAGGAAGTGGGGAGGAACAATTTCAATTGAGAATTGA 1464 0.4085 MPIDTPLLDNSINNSSGVADHEEEKPLKIVHKFGAESKKLWKIAGPTILTALSQFSLGAFTSTFVGHVNELDLAAFSVENSVIAGFAFGFLLGMGSALETLCGQAFGAGHLRMMGIYMQRSWIILVATALLLLPFYIWATPLLKLVGQTDEVAEAAGTFALWMIPQIFAYALNFPVQKFLQAQRKVMVMLLISVAVLVLHIPLSWFLILKLKWGLVGAAITLNTSWWLIVIGQTSYVIITKSDGAWSGFSWLAFADLFSFVKLSLSSAVMLCLEFWYLMVLVVVTGHLANPLVPLDAVSICMNINGWDMMIALGFNAAISVRVSNELGAGDFRAAKFSVIVVSLTSISIGVVAMIIVLTTRDYFPQLFTSSDDVAKATTKLAALLSVTVLLNSLQPVLSGVAIGAGWQALVAYINLGCYYIVGLPAGILLGFTFGFGAEGIWSGLIGGITMQTIILIIITSLTNWKKEADQADSRVRKWGGTISIEN* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5865 487 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 473 - -
Mal1g5865 487 CDD MATE_eukaryotic 36 469 IPR045069 GO:0042910|GO:1990961
Mal1g5865 487 Pfam MatE 46 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g5865 487 Pfam MatE 267 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal1g5865 487 PANTHER PROTEIN DETOXIFICATION 33 21 473 - -
Mal1g5865 487 TIGRFAM matE: MATE efflux family protein 46 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5865 Mal-Chr1 136254946 136259078 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5865 1 136254946 136259078 Mal1g5865 1 136254946 136259078 ECH