Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5859 ATGGCGAAATCGAGCGTCGACGATGTTGAACTCCGGCGAGCTTGCGAATCTGCAATTGAAGATCCTAAGCAGAAGATCATCTTATCACTCCGTGTTGCCAAAAGTCATGGCATCTTGGGAAAATCTTCAAAGCTTGTTAGTCGTCAAATGGCCAAACCTAGGGTTCTTGCTCTCTCCACATTAACAAAGGGTCAGACAACTACGGCTTTTCTTAGAGTTTTGAAGTATTCCACGGGAGGAGTTCTTGAACCTGCAAAATTATACAAGCTAAAGCATCTCTCAAAAGTAGAAGTTTTAACAAATGATCCCAGTGGATGTACATTTACACTGGGATTTGATAACCTTAGAAGCCAAAGTGTGGCTCCTCCGCAATGGACAATGCGCAATCTTAACGACAGGAATCGTCTCCTTCTTTGCATCTTGACCATCTGTAAAGATGTTTTGGGTCGCCTTCCTAAGGTTGTTGGTATAGATGTCGTGGAGCTGGCTCTCTGGGCTAAGGAAAATAGGGCCCCTGTTCCTACTCAAAGTAATGTACAAGATGGTGGTCCCGTTGCTTCCGCTATGACTGAGAGAGAGTTGAAAGTCAATGTTGAAAAAGACCTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTGTTGGTGAAGCAGAAGAATTTTCTGAAAGACTGAAGAGAGAACTCCAGGCTCTGGAAGCAGCAAATGTGCACGCCATTTTAGAAAGTGAGCCTTTGATAAATGAGGTGTTGCATGGACTTGAAGCAGCAACAAATGTTGTCGATGATATGGATGAATGGTTAGGCACATTCAATGTAAAACTCCGGCACATGAGAGAGGATATAGCATCAATAGAAACCCGCAACAACAGCTTGCAAATGCAATCGGTAAATAACAAATCTCTCATTGAGGAGCTTGATAAGCTTCTTGAGCGGTTGCGTGTCCCTTCTGAGTATGCAACGTGTTTGACAGGAGGTTCATTTGATGAAGATCGGATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACTAGTGCCTTGCGTGGTCTTGAAGTGCCCAATATTGACCCTACTTATGCAAGCATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAGGAGAGCTTCTGAATTCTTGAGAAATTACTTTGCTAGTTTGGTGGACTTTATGATAAGTGATAAAAGTTACTTTTCTCAGCGGGGACAGTTGAAGAGGCCCGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGTCTTCTTCAGCATTTAAAGAGTCTTGACAAGAATTGCTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTTTAAATTTGCTTCTTCGCCGGGAGGCCCGGGAATTTGCAAACGAACTCCGTGCTAGTACAAAAGCATCTAGAAATCCTACTGTATGGCTTGAAGGTTCAACTGGTTCTGGTCAGAATGTAAATGCTACTGATACTTCTACAGTCTCTGATGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACACTGGTTCCTCCAGGAGGTGTTGTTAACGGAAATAAAGCTGGTTATGACGATGATGACGATTTGGGAATCATGGACATTGATGAGAATGATAGTAAATCTGGGAAAAATTCTGCTGAGCTTGCAGCTTTAAATGAATCACTTCAGGATTTACTGGACGGAATTCAAGAAGACTTTTATGCTGTTGTGGATTGGGCATACAAGATTGATCCTTTACGCTGCATATCAATGCATGGAATAACAGAACGCTATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGTCTTTTGCTTGGCGACCTAGAGTCTCGGATATCTATGCAGTTCAGCCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGAAATGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGGTTTGCGACCCTTGCAACTCGTATGGAGCAGTACATTCAGGGACAGTCTAGGGATTTGGTTGACCAAGCATATACAAAATTTGTTAGCGTTATGTTTGCAACCTTGGAAAAAATATCACAAACAGATCCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCCGCCTTTCAGAATAGTTTGTATGACCTCGCCAACATTGTGCCCACTTTGGCCAAGTTTTACCATCAGGCCAGTGAAGCCTATGAACAAGCTTGCACACGCCATATTAGCATGATCATATACTTTCAATTTGAACGCCTTTTCCAGTTTGCTCGAAGGATTGAGGACTTGATGTTCACCGTTGCATCTGAAGAGATACCTTTCCAGCTTGGGCTGTCAAAAATGGATCTTCGGAAAATGTTAAAAACCAGCTTATCTGGGGTTGACAAGTCCATTAATGCGATGTATAAGAAACTACAGAAGAATTTGACTTCAGAAGAACTGTTGCCTTCCTTATGGGACAAATGCAAGAAGGAGTTTCTTGACAAGTACGAAAGTTTTGCTCAACTTGTGGCTAAGATTTACCCTAATGAGACATTCACATCTGTTGCAGAGATGAAAGGCATTTTAGCTAACATGTAA 2655 0.4222 MAKSSVDDVELRRACESAIEDPKQKIILSLRVAKSHGILGKSSKLVSRQMAKPRVLALSTLTKGQTTTAFLRVLKYSTGGVLEPAKLYKLKHLSKVEVLTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNLNDRNRLLLCILTICKDVLGRLPKVVGIDVVELALWAKENRAPVPTQSNVQDGGPVASAMTERELKVNVEKDLVSQAEEEDMEALLGTYVMGVGEAEEFSERLKRELQALEAANVHAILESEPLINEVLHGLEAATNVVDDMDEWLGTFNVKLRHMREDIASIETRNNSLQMQSVNNKSLIEELDKLLERLRVPSEYATCLTGGSFDEDRMLQNVEACEWLTSALRGLEVPNIDPTYASMRAVKEKRAELEKLKSTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKAGYDDDDDLGIMDIDENDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSVMFATLEKISQTDPKYADIFLFENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYFQFERLFQFARRIEDLMFTVASEEIPFQLGLSKMDLRKMLKTSLSGVDKSINAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPNETFTSVAEMKGILANM* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5859 884 Coils Coil 282 319 - -
Mal1g5859 884 Pfam Exocyst complex component Sec3 225 486 IPR019160 GO:0000145|GO:0006887
Mal1g5859 884 Pfam Exocyst complex component Sec3 578 868 IPR019160 GO:0000145|GO:0006887
Mal1g5859 884 PANTHER SEC3/SYNTAXIN-RELATED 1 884 - -
Mal1g5859 884 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 884 - -
Mal1g5859 884 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 145 IPR028258 -
Mal1g5859 884 SMART Sec3_PIP2_bind_2 49 147 IPR028258 -
Mal1g5859 884 Coils Coil 222 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5859 Mal-Chr1 136206076 136221083 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5859 1 136206076 136221083 Mal1g5859 1 136206076 136221083 ECH
Mal1g5859 1 136206076 136221083 Mal2g0590 2 6812686 6830811 PCT