Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5847 ATGCTAAGAGATGAAATCATTGGTTCGAAAAGCGCGAGGCACAGCGCAACCGTATCTACGGCGTCGAATAAAGTTCTTGTGGCGGTTAAAGCGGAGAAGGTGATTTCCAACACCGCATTAGCATGGGCGCTTACTCACATCGTTCATTCCAGTGACTCAATCACTCTTCTCGCGGTTTATTCTACTGAAAAAACTGGGAGAAGATTCTGGAATTTTTCGAGACTCGGCGGAGATTGTTCGAATTTGAAGAGACTCGCCGGCGCGGGAAAGTCACCGGAGCAGATATCTGAAATCTCTGAGTCTTGTGCTCAGATGATTTTTCAGTTGCATAATCATGTTGAGGTTAGGGTGAAGATTAAGGTTGTCACAGGAACTCCAGCTGGTGCTGTGGCGGCTGAAGCTAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAAATAAAGCAAGAGATAAAACATTGCATGGATGAACTCGGCTGCAGCATTGTGGTGATGAACGGCTCACAGCCTAAAGTCCTCAGACTTAATTTAGGAGGACACTCCAATGAACTCCAAACTCCGTTTATATCTTCTTCCGCTTCACCAGGTATAGAAATTGGAAAACTAAAAGGCCGCAGATTGAAGCATTCCACCCCAGTTGGTAGCCCTGAAGAAACAGGTTCTTCTGTTACAAGAAGTATTGGAGTAGATTCAGTGTCAAGTTCAGACTCAATGACTTCCCCTTTCCTGGTCTATAAAGAAAACCCTCTGTATGAGGGTCTTGGATCACACAAAAGAATAAACAAACCAATCAACAAGCCAAAAGATTTCAACTTCCAGCAACCATTGTACTTGGAAAGGGATAGCCCGCCCCCTTCAGTGAAACTCCCAACATCATCTCTGGCTAGTGATAAGAACACTGAATTTTGGATCCATCAGAACCACATGAATAGTGAGAAGCTTCAAAGAGCTGAAAACAGAATAATTGAAAGAACTAAATCTCCAAATTCTAAAACTTTACTTGAGAATTTTTTAGACTGTGATCAAGAGAAGAGAACGAATGAGCTTGAGTTTAACAAAGCTGAAAGTAGAAGTTATGTCACTAGCTCAAGCATCAGAGATAGTCCTATTCCTTTGGGTAGAAATTCATCTATACCTCCTCCCTTGTGCTCACAGTGTCAGAATATAGCACCTGTATTTGGAAATCCTCCTAGACGGTTTTCTTATAGAGAGTTAGCAGAAGCTACTGACATGTTCTCAGATTTGAATTTTTTGGCTGAAGGTGGATTTGGTGTGGTTCACAAAGGAATACTCAAAGATGGTCAAGTTGTTGCAGTGAAACAATTAAAATTTAGTGGCTCTCAAGCAGATCTTGATTTCTGCAGGGAAGTTCGGGTTTTGAGTTGTGCACAACACAGAAATGTTGTATTGCTGATAGGATTTTGCACAGAGGAAAATGTGAGGATATTAGTCTATGAGTATATATGTAACGGATCCTTGGACCTCTGCTTATATGGCAAAGAGAGTGTACCTTTGGATTGGAACTCACGGTTAAAGATAGCTATCGGAGTTGCACGAGGCTTACGCTATCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGATATTAGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATTAATACTGAAGATCGCGTTATGGGAACTTCAGGGTACATCGCACCAGAGTATCTTGATGCTGGAATTCTTACATGTAAAGTAGATGTATATGCATTTGGAATTGTTTTATTAGAGTTAATAACAGGTCGAAGAATCAGCGAGTTGGAACAGCTCAATGGACATTCATATCTTTCTGAATGGTTTCACCCCCTACACATGTTGGACCCCAATCATATCTTACAAAACGTTGGATCTCTCAACCCATGGTTGGATTCTGAAGGGTCACTAGAATTTAATCTTCAATTGCAAGCCATGGCAAAAGCTGCTTCATTGTGTATACGTTTGGATCCTGATTCTAGACCCCCAATATCAAAGATCCTCAGGTTGCTGGAAGGGGGCAATCCAGTTCGTTCGTTGGGTTTAGACATCAATTCAGCGGGCAACATAAGTGGTCATTTAAGTGGTTTGAGTTCTCTTACTCCTCCTAAAGGTACAATAAGCCATTCTCGTATGTTATCACATTGA 2208 0.4176 MLRDEIIGSKSARHSATVSTASNKVLVAVKAEKVISNTALAWALTHIVHSSDSITLLAVYSTEKTGRRFWNFSRLGGDCSNLKRLAGAGKSPEQISEISESCAQMIFQLHNHVEVRVKIKVVTGTPAGAVAAEARWSGSHWVILDKKIKQEIKHCMDELGCSIVVMNGSQPKVLRLNLGGHSNELQTPFISSSASPGIEIGKLKGRRLKHSTPVGSPEETGSSVTRSIGVDSVSSSDSMTSPFLVYKENPLYEGLGSHKRINKPINKPKDFNFQQPLYLERDSPPPSVKLPTSSLASDKNTEFWIHQNHMNSEKLQRAENRIIERTKSPNSKTLLENFLDCDQEKRTNELEFNKAESRSYVTSSSIRDSPIPLGRNSSIPPPLCSQCQNIAPVFGNPPRRFSYRELAEATDMFSDLNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADLDFCREVRVLSCAQHRNVVLLIGFCTEENVRILVYEYICNGSLDLCLYGKESVPLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGTSGYIAPEYLDAGILTCKVDVYAFGIVLLELITGRRISELEQLNGHSYLSEWFHPLHMLDPNHILQNVGSLNPWLDSEGSLEFNLQLQAMAKAASLCIRLDPDSRPPISKILRLLEGGNPVRSLGLDINSAGNISGHLSGLSSLTPPKGTISHSRMLSH* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5847 735 SMART tyrkin_6 413 691 IPR020635 GO:0004713|GO:0006468
Mal1g5847 735 Gene3D Transferase(Phosphotransferase) domain 1 489 698 - -
Mal1g5847 735 MobiDBLite consensus disorder prediction 215 236 - -
Mal1g5847 735 SUPERFAMILY Protein kinase-like (PK-like) 391 692 IPR011009 -
Mal1g5847 735 Gene3D Phosphorylase Kinase; domain 1 387 488 - -
Mal1g5847 735 ProSiteProfiles Protein kinase domain profile. 413 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5847 735 Gene3D HUPs 7 185 IPR014729 -
Mal1g5847 735 Pfam Protein tyrosine and serine/threonine kinase 419 612 IPR001245 GO:0004672|GO:0006468
Mal1g5847 735 ProSitePatterns Tyrosine protein kinases specific active-site signature. 534 546 IPR008266 GO:0004672|GO:0006468
Mal1g5847 735 MobiDBLite consensus disorder prediction 208 236 - -
Mal1g5847 735 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 723 - -
Mal1g5847 735 PANTHER OS01G0253100 PROTEIN 19 723 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5847 Mal-Chr1 136072319 136078179 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mal1g5847 PK_Tyr_Ser-Thr 3.1e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5847 1 136072319 136078179 Mal1g5847 1 136072319 136078179 ECH