Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5846 ATGCAAACTTTATTTTCACCTTTGTTAGAACCAGACCTATCTTTAAACATAAGTCCACCTTCTAATATTGAAGCCAAAGGAAGAATAACAAAAGCACTTTATAATGATAATAATAATAATAATAATAATATATGTTCAATATCAACTACTTCTGATTCAGCTAGTAGTGGAAGTGAGTTAAGCCATGAAAATCCATTTATCTATCCTCCTCATCAACAACGTGACTCAACATTGAGATTAGGCTTAATTGGAAACTCAGATTTGATGAATCCACATCATCATAATCATCACCTTCATCGTCATCAACTACAAGCTGGTGTATCAAGAAACTTTAACCAACACTTCCAACCTCACATCTATGGCCGCGATTTCAAGCGAAATACAAGAGTTGTTAATGGTGTTAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACTACAACCCTTCATTCCCATTTTGTTCATGCTGTTCAACTTCTTGGTGGTCATGAAAGGGCAACTCCAAAATCTGTGTTAGAGTTAATGAATGTTAAAGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCAGGTCATGGGATACTGCAGACACAAGGGATTAATATTGTTCCTTTGCATGGAGCTAATTCTAATTCAGCTTGTGAGAGACCAAATTTACCTCAACCACTTCAAAATTCACATAGGACATCTTGGCAACCATCAATAGAGACAAATACAAACAATACTGAAGAAAAATCCGAAATTGGTTTGACGTATTCTCACTTCAAGGAAAATGATACCATGGTGAATAGGTCGGATTCAGAGTCTATGATTGATTTAGAATTCACACTTGGAAGGCCTAATTGGGAAAAAGAGCATTCAGAATCATCAAGAGAATTATCTCTTCTCAAGTGTTAA 936 0.3622 MQTLFSPLLEPDLSLNISPPSNIEAKGRITKALYNDNNNNNNNICSISTTSDSASSGSELSHENPFIYPPHQQRDSTLRLGLIGNSDLMNPHHHNHHLHRHQLQAGVSRNFNQHFQPHIYGRDFKRNTRVVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGILQTQGINIVPLHGANSNSACERPNLPQPLQNSHRTSWQPSIETNTNNTEEKSEIGLTYSHFKENDTMVNRSDSESMIDLEFTLGRPNWEKEHSESSRELSLLKC* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5846 311 Pfam Myb-like DNA-binding domain 142 193 IPR001005 -
Mal1g5846 311 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 311 - -
Mal1g5846 311 Gene3D - 140 197 - -
Mal1g5846 311 SUPERFAMILY Homeodomain-like 138 194 IPR009057 -
Mal1g5846 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 141 194 IPR006447 GO:0003677
Mal1g5846 311 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 311 IPR044847 GO:0000976|GO:0006355|GO:0010158
Mal1g5846 311 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5846 Mal-Chr1 136036017 136039375 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal1g5846 Myb_DNA-binding 1.6e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5846 1 136036017 136039375 Mal1g5846 1 136036017 136039375 ECH