Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5837 ATGGGAGAAGGAACACAAAACAGTGGTGGGTGCTGTAGATCTTGGGAGGAAGATATTTATTGGACCCATTTTCAATTCATCCATTTCACACAATTTCTTCGCAACAGTGATTTTCAACAACAACTTGCACTTCCTAAAACATTTTCAGACAATTTAAAGAACAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCTAGTGGAGTTGTGTGGAATATAGGGCTGACAGCTAGAGATGATACTGTTTACTTCATGGACGGTTGGCAACAATTCGTGAAGGACCACTCGTTGAAAGAGAATGATTTCCTTGTCTTCAAGTACAATGGTGAATCACTCTTTCAGGTTTTAATCTTTCATGGAGATAGTTTATGTGAGAAGGCGGCTTCTTATTTTGTTCGAAAATGTGGACAAACTCATTCTGAACAAGGGGGTAACAAGGGAAAGAATTCAAACAATTCTCTTGAAGAAGTCAATATTCTTAATGGCAGTGTTGAATGCGGTTCGCCTGAAAAATCATGGGAGGAAGACATTTACTGGACACATTTCCAATTCAAACATTTCACCCAATTTCTTTGCACTGATTTTGAACAACAACTTGCTCTTCCTAAAACATTTTCAGACAATTTAAAGAAGTTGCCAGAAAATGTGACCCTTAAAGGTCCTAGTGGAGTTGTGTGGAATATAGGGCTGACAACTACAGATGATACTGTTTACTTCGCGGACAGTTGGCAACTATTTGTGAATGTCCACTCTTTGAAAGAGAATGATTTCCTTGTCTTTAAGTACAACGGTGAATCACACTTTGAGGTTTTAATATTTGATGGAGAATACTTCTGTGAGAAAGCAGCTTCTTATTTTGTCGGAAAACGTGGACATGCTCAAACTGAACAAGGGGGTAGCAAGGCAATGGAAACAAACAATTCTGTTGAAGAAGTCAACACTCCTTCTAATAGTGGTGTTGAATGTGGTTTACATAAGAAATTTCGGCATCTTAACAATATAGAAACACCATTAGTTGTACCTTATGAAACTACCAATGATAAGACTTTTAATGCTGGTATTAAATCTGATTCCTCTGAGCAGTTCATGGTTGATGCTGTCACTAAGACCACAGCTATACAGTTCACCTTCCATTCAACCGGCAAAAGGTCCAAGAGGAGAAGAAGATCACCAGAAGCAGCTAATTGTTTTGAGAGAGCACATGATTGGCTGGCTTGTAACAAGGAACAGTCAGAGGCAGCCAACCTGAATAGAAGTGGGAAGGAAGATGACCATTATATTCTCAGCAGTGCTTCACCGTCAAAGTTATCAGCATATGATGAGAAATTGATAGCCCTATCATTTACTTCCTCTTTTCCATATTTTGTTAAAATAATGAAAACCTTCAACGTCGAACGTCCACGTATTCTGAATATTCCATATCTATTTTCGACGGCACATCTTCCAAACTGCAAGATAAAGATCGTTCTTCATAATTTGAAGGGAGAACGCTGGACCGTCAATTCTGTTCCTAGAAAGAGATTGCATACAAGTCATATTCTATGCGGAGGATGGTTGGATTTTGTTCGTGACAATAGCATAAAGGTTGGAGATGTCTGCATTTTTGAACTTATACGTGAGTGTGAATTACGTGTTCGCATCGCTGAGGTGGGAAAAGATGGGCTAGAATGCCAGGTTGGAAAACTAGCTTTGAGTAAGCCTAGTGCAAGACATGATGTTGCTAGCCATAGGACTTCCAAATATATGCTGAAGAAACCTAAAGTCAGCTCAAAGTGCAGAACAAAAGTTGATCTATCAGATGAAAAGTTGTCAACGATTTGTCAAGAAGCTGTTTTATCCACTGAGTTAAAGAAATCCGGAAGAGCTTCAAATACTTTGAAGAAGACAGGGCTTTCCCCCAAGTCGAAAGCTGCCCATAAAAAGTCGGACAGCTGTACTGAGGAAACACCACGTGAAGATGAACTAAGCTCCCAGGCTAATGATAGCTTGAGAACGTTGTTTGCACGGGACGAACAAAGAGTAGCTGAAGCTTTCACTTTCACATTTCCTTATTTTGTGAAAATCATGAAGAAGTTCAATGTCTGTGGATCATACACTTTGAAAATCCCACGTCAGTTCTCTACTGCACATCTCCCCGAATACAATACAGAAGTTACGCTTCGCAATTCAAAAGGCGAATGTTGGACTGTGAAATCCGTCCCATATGTTCAAGGGGGAGCAACTATTCACACCTTTTGTGGGGGATGGAACTCCTTTGTTCGCGATAATGACATCAATTTTGGAGACACTTGCATTTTTGAGCTGGTTTCTGATTATGTGATGCAGGTTCATATATCTGGGTGTGGAAAGGAAGGTCTTGACCGTCAAAATGGGAATGTGAAACTTAATAGCGCTACTGTCCCATCTACCTGCTAA 2412 0.3993 MGEGTQNSGGCCRSWEEDIYWTHFQFIHFTQFLRNSDFQQQLALPKTFSDNLKNKLPENVTLKGPSGVVWNIGLTARDDTVYFMDGWQQFVKDHSLKENDFLVFKYNGESLFQVLIFHGDSLCEKAASYFVRKCGQTHSEQGGNKGKNSNNSLEEVNILNGSVECGSPEKSWEEDIYWTHFQFKHFTQFLCTDFEQQLALPKTFSDNLKKLPENVTLKGPSGVVWNIGLTTTDDTVYFADSWQLFVNVHSLKENDFLVFKYNGESHFEVLIFDGEYFCEKAASYFVGKRGHAQTEQGGSKAMETNNSVEEVNTPSNSGVECGLHKKFRHLNNIETPLVVPYETTNDKTFNAGIKSDSSEQFMVDAVTKTTAIQFTFHSTGKRSKRRRRSPEAANCFERAHDWLACNKEQSEAANLNRSGKEDDHYILSSASPSKLSAYDEKLIALSFTSSFPYFVKIMKTFNVERPRILNIPYLFSTAHLPNCKIKIVLHNLKGERWTVNSVPRKRLHTSHILCGGWLDFVRDNSIKVGDVCIFELIRECELRVRIAEVGKDGLECQVGKLALSKPSARHDVASHRTSKYMLKKPKVSSKCRTKVDLSDEKLSTICQEAVLSTELKKSGRASNTLKKTGLSPKSKAAHKKSDSCTEETPREDELSSQANDSLRTLFARDEQRVAEAFTFTFPYFVKIMKKFNVCGSYTLKIPRQFSTAHLPEYNTEVTLRNSKGECWTVKSVPYVQGGATIHTFCGGWNSFVRDNDINFGDTCIFELVSDYVMQVHISGCGKEGLDRQNGNVKLNSATVPSTC* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5837 803 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 582 793 - -
Mal1g5837 803 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 169 561 - -
Mal1g5837 803 SUPERFAMILY DNA-binding pseudobarrel domain 24 118 IPR015300 -
Mal1g5837 803 CDD B3_DNA 682 777 IPR003340 GO:0003677
Mal1g5837 803 SMART B3_2 454 550 IPR003340 GO:0003677
Mal1g5837 803 SMART B3_2 29 120 IPR003340 GO:0003677
Mal1g5837 803 SMART B3_2 684 783 IPR003340 GO:0003677
Mal1g5837 803 SMART B3_2 183 275 IPR003340 GO:0003677
Mal1g5837 803 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 13 170 IPR044837 -
Mal1g5837 803 CDD B3_DNA 452 546 IPR003340 GO:0003677
Mal1g5837 803 MobiDBLite consensus disorder prediction 622 657 - -
Mal1g5837 803 Gene3D - 667 780 IPR015300 -
Mal1g5837 803 Gene3D - 439 550 IPR015300 -
Mal1g5837 803 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 582 793 IPR044837 -
Mal1g5837 803 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 169 561 IPR044837 -
Mal1g5837 803 Gene3D - 179 276 IPR015300 -
Mal1g5837 803 Gene3D - 22 123 IPR015300 -
Mal1g5837 803 ProSiteProfiles B3 DNA-binding domain profile. 27 120 IPR003340 GO:0003677
Mal1g5837 803 SUPERFAMILY DNA-binding pseudobarrel domain 679 779 IPR015300 -
Mal1g5837 803 SUPERFAMILY DNA-binding pseudobarrel domain 447 547 IPR015300 -
Mal1g5837 803 ProSiteProfiles B3 DNA-binding domain profile. 454 550 IPR003340 GO:0003677
Mal1g5837 803 MobiDBLite consensus disorder prediction 635 657 - -
Mal1g5837 803 ProSiteProfiles B3 DNA-binding domain profile. 684 781 IPR003340 GO:0003677
Mal1g5837 803 PANTHER PLANT-SPECIFIC B3-DNA-BINDING DOMAIN PROTEIN 13 170 - -
Mal1g5837 803 CDD B3_DNA 28 117 IPR003340 GO:0003677
Mal1g5837 803 Pfam B3 DNA binding domain 454 546 IPR003340 GO:0003677
Mal1g5837 803 Pfam B3 DNA binding domain 684 770 IPR003340 GO:0003677
Mal1g5837 803 Pfam B3 DNA binding domain 29 117 IPR003340 GO:0003677
Mal1g5837 803 Pfam B3 DNA binding domain 196 273 IPR003340 GO:0003677
Mal1g5837 803 CDD B3_DNA 194 273 IPR003340 GO:0003677
Mal1g5837 803 ProSiteProfiles B3 DNA-binding domain profile. 183 275 IPR003340 GO:0003677
Mal1g5837 803 SUPERFAMILY DNA-binding pseudobarrel domain 182 273 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5837 Mal-Chr1 135943351 135951354 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal1g5837 B3 1.6e-13 CL0405