Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5829 ATGGCACTGAACGATTTCTTCGCCGGAGAAATTGCCACAGAGCTTCTAAAAATGCTCTATAGCATATCTCGAAAATCCCTTTTATGCAGAACAAGTGCAGAACAACTCATAACATACATCAATGAAATCCTCCCTACTATACAAGAAATCAAATACTCCGGCGTAGAGTTACCAGAGCAAAGACAGTTTCAGCTCGACCGCTTCTCGGAGATTCTCCGTTCGGGGGTCGAGCTTTCTCACAAAGTTCTATCTTCAAGCAGATGGAACGTGTACAAGAATTTACAGCTTGCAAAGAAGATGGAAAAGCTTGAAAAGAACGTGTCAAGGTTTTTGCATGGTCCCATGCAGGCTCATATATTAGCTGACGTGCATCACACAAGGTTTGAGATGGCTGAACGGTTTGACCGGGTTGAAGCGTCGAATAGGAAGTTGGAGAAGTATTTTGGTGAGATGAAGATTGGTGTGGGAGGTGGAGGGTGGGTGGAGGAAGCTGTGAGGTCTTGTATGGAGGGGGATGAGAATTGGGTTGAGGGTAGTTGTGGGAATTTGAATTTGAGTGTTGGTTTGGATTTGGGGAAGAAGAAAGTTAAGGAGATGGTTATTGGAAGAGAGGATTTGTGGGTTGTTGGGATTCATGGGATTGGTGGATCCGGGAAAACTACTCTGGTTAGAGAGGTTTGTAGAGATGAAGAAGTGAGATGTTATTTTAAGCAGGAGAGAATATTGTTTCTGACTGTTTCACAATCTCCGAATGTGGAGCAGCTAAGGACAAAGATTTGGGGACACATCATGGGAAACAGAAGCTTGAATCCAAGTTATGTTGTTCCTCAGTGGATACCACAATTTGAATGCAGAAATGAAGCTAGAACCTTGGTTGTTCTAGATGATGTTTGGTCACAAGCAGTTCTTGAACAGCTTGTGTGTAGAATACCAGGTTGCAAGTTTGTTGTTGTTTCCAGGTTCAAATTCCCAACAATATTCTCTGCAACTTATAAGGTTGAATTGTTGAATGAAGAGGATGCTCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTCACAGCTAATGAGAATTTGGTCAAACAGGTTGTAAGTGAGTGTGAAAAGCTTCCATTGGCTCTTAAAGTGATTGGAGCTTCATTGAGAGATCAAACTGAAATGTTTTGGGAAAGTGTTAAAAACAGGTTATCTCAAGGCCAAAGTATTGGAGAATCTCATGAAATCAACTTAATTGAAAGAATGGCAATAAGTATCAACTACCTAAAGGAAGAGATCAAAGAGTGCTTCTTAGACCTATGTTCATTCCCTGAGGATAAAAGAATCCCTCTAGATGTTCTCATCAATATGTGGGGTGAAATTCATGATATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAGCTCTCCAATAAAAATCTTCTCACCTTGGTGAAAGAAGCGCGTGCTGGTGGCATGTACAGCAGTTGCTTTGAGATCTCAGTTACTCAACATGATGTACTTAGAGACCTCGCACTTAATTTGAGTAATCGTGAAAGTATTAATGAACGACGACGATTAGTTATGCCAAAACGAGAGAAAGGACTCCCAAAAGAGTGGCTGAGAAACAAACATAAACCATTCGAAGCACAAATTGTTTCGATTCACACAGGTGAAATGAAGGAAAAGGATTGGTGTAAACTTGAATTTCCAAAGGCTGAAGTTCTGATCATAAATTTCACATCTAAGGATTACTTTTTACCTCCTTTCATAGATAGAATGCCAAATTTGAGAGCACTAATAGTAATAAACTATAGTGCATCATATGCTTGTCTTCACAATGTTTCAGTTTTCAATAATTTAGCCAACTTGAGAAGCCTATGGCTTGAAAAAGTTTCCATCCCTCAATTTGGAGGCATTCTCATGGAAAACTTAGGCAAGTTGTTTATAGTCTTGTGTAAGATTAATAACAATCTAGAGGGTAAAGATGTAAATCTGTCTCAAATATTTCCTAACCTCACTGAGCTCACACTTGATCATTGTGAAGATGTTACTAAGTTGCCCTCAAGCATTTGTAGGATACAATCACTCCAAAACTTGAGTCTCACAAATTGTCACTGTCTGGCTCAACTTCCTGTTGAATTAGGCGCGCTACGATCTCTAGAGATTCTCCGGTTATATGCTTGTCCGGAATTGAAAACACTTCCTCCTAGCGTCTGCGACATGATTCGATTGAAGTATATTGACATTTCGCAATGTGTTAACTTGTCATTTTTCCCTGAAGAGATTGGCAAATTAGTAAGCTTGGAAAAGATTGACATGAAGGAATGTTCCATGATTAAGAATGTACCAAAGTCTGCTATTTCATTGAAGTCATTAAGACTTGTAATTTGTGATGAGGAAGTGTTTAGTATGTGGAAAGATGTCAAGAAGGCCAAGCCAAATGTTCATATTCAAGTATCAGAACAGTACTTTGATTTGGATTGGCTTAGCGAGTGA 2487 0.3953 MALNDFFAGEIATELLKMLYSISRKSLLCRTSAEQLITYINEILPTIQEIKYSGVELPEQRQFQLDRFSEILRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLHGPMQAHILADVHHTRFEMAERFDRVEASNRKLEKYFGEMKIGVGGGGWVEEAVRSCMEGDENWVEGSCGNLNLSVGLDLGKKKVKEMVIGREDLWVVGIHGIGGSGKTTLVREVCRDEEVRCYFKQERILFLTVSQSPNVEQLRTKIWGHIMGNRSLNPSYVVPQWIPQFECRNEARTLVVLDDVWSQAVLEQLVCRIPGCKFVVVSRFKFPTIFSATYKVELLNEEDALSLFCHHAFGQKSIPFTANENLVKQVVSECEKLPLALKVIGASLRDQTEMFWESVKNRLSQGQSIGESHEINLIERMAISINYLKEEIKECFLDLCSFPEDKRIPLDVLINMWGEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLALNLSNRESINERRRLVMPKREKGLPKEWLRNKHKPFEAQIVSIHTGEMKEKDWCKLEFPKAEVLIINFTSKDYFLPPFIDRMPNLRALIVINYSASYACLHNVSVFNNLANLRSLWLEKVSIPQFGGILMENLGKLFIVLCKINNNLEGKDVNLSQIFPNLTELTLDHCEDVTKLPSSICRIQSLQNLSLTNCHCLAQLPVELGALRSLEILRLYACPELKTLPPSVCDMIRLKYIDISQCVNLSFFPEEIGKLVSLEKIDMKECSMIKNVPKSAISLKSLRLVICDEEVFSMWKDVKKAKPNVHIQVSEQYFDLDWLSE* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5829 828 PRINTS Disease resistance protein signature 284 298 - -
Mal1g5829 828 PRINTS Disease resistance protein signature 760 776 - -
Mal1g5829 828 PRINTS Disease resistance protein signature 208 223 - -
Mal1g5829 828 PRINTS Disease resistance protein signature 371 385 - -
Mal1g5829 828 SUPERFAMILY L domain-like 571 794 - -
Mal1g5829 828 Pfam NB-ARC domain 195 415 IPR002182 GO:0043531
Mal1g5829 828 Gene3D - 335 417 IPR042197 -
Mal1g5829 828 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Mal1g5829 828 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Mal1g5829 828 Gene3D - 184 325 IPR027417 -
Mal1g5829 828 Gene3D Ribonuclease Inhibitor 528 813 IPR032675 -
Mal1g5829 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 436 IPR027417 -
Mal1g5829 828 Gene3D - 418 507 IPR036388 -
Mal1g5829 828 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 825 IPR044974 GO:0006952
Mal1g5829 828 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5829 Mal-Chr1 135825984 135829442 Wgd