LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g5822	ATGTTGTCACAAAAAGTACTATTGTGGTCTTTGATTTTTTTAGTGTTGCACTTTGCAATCTCATGCAAAGCCAACCAACAAAGTCAATACTTCTACAAGTTTATTCAATCAAAAAGGTTTCAACAAAAGCCTTCTTCACATGGAGAAGCTTATTATTCAAGTGATGTTGTTGATGAACATGTTTCAAAGGTAAATGTTGTTGAACAACAATTAAGGTTGATGGAAGCTGATAAGGTGAAGTCTTTGCCTGGACAACCAAAAGGGGTGAATTTTGATCAATATGCTGGCTATGTAACTTTGGATGCCAAATCAAGGAGAAAACTTTTCTACTACTTTGTTGAATCGCCTTTAAATTCTTCCACAAAGCCTCTTGTTCTATGGCTAAATGGAGGACCTGGATGCTCTTCCTTTGGGTATGGAGCCATGCAAGAATTAGGACCTTTTAGAGTCAATAGTGATGGAACCACACTTTCCCTTAATAAAGATGCATGGAACATTGTGGCAAATGTTATCTTCCTAGAGTCTCCAGTTGGAGTTGGATTTTCTTATTCAAAAAAATCCTCTAACATTGGTGACAATAGCACAGCCAGAGATTCTTACATTTTTCTTCTAAAATGGCTTGAGAGATTTCCACAGTATAAGACTCGTGACTTCTTCATAGCTGGTGAAAGTTATGCTGGCCATTATGTCCCTCAGCTAGCTCAACATATTCTATCAAAAAATAAGAAAAGGAAAAATCACAAAGTGATCAATTTGAAAGGGATCACGGTTGGGAACGGTTGGATAGATGACAATTATTGTACAAAGGGAATGTATGATTATTACTGGATGGCTGGTCTGAACTCTGATGAAACACATGAAGGTATTCAAAAACTTTGTGACTTTAGGAACTTCAATGTAACAAATGAATGCATTGGATATGAAAATAGAGCGACTGATGAACTTGGAGATATTGACGTTTACAACATATATGCCCCACTTTGTAATTCATCATCTACAACAAAAAATGTTGCTAGTTACTCTGTCAGTGATTTCGACCCTTGTGCTGAAGATTATACCATCGCCTATTTAAATCTCCCAGAAGTTCAAGAGGCTCTTCATGTTAAACCCACAAAATGGTCCCCTTGCAGTGATCTGAGTTGGACAGATAGTCCATCAAGTATTCTACCAACTATAAATCGATTAATATCAAGTGGTATAAGCATTTGGCTATACAGTGGTGATATAGATGGCCGTGTTCCCATAACCTCAACAAAGTACTCAATAAATTCCTTAAAACTACCTGTACATACAGCATGGCGTCCATGGTACATTGGCAAAGAGGTTGGAGGATATGTGATTGGTTACAAAGGGCTCACACTTGTCACTGTAAGAGGAGCTGGTCACATGGTTCCAAGTGACCAACCACAGCGAGCACTAGCCATGATCTCATCTTTCCTTATTGGAAAACTTCCTCCTAAATTGAATTCTTAA	1473	0.3781	MLSQKVLLWSLIFLVLHFAISCKANQQSQYFYKFIQSKRFQQKPSSHGEAYYSSDVVDEHVSKVNVVEQQLRLMEADKVKSLPGQPKGVNFDQYAGYVTLDAKSRRKLFYYFVESPLNSSTKPLVLWLNGGPGCSSFGYGAMQELGPFRVNSDGTTLSLNKDAWNIVANVIFLESPVGVGFSYSKKSSNIGDNSTARDSYIFLLKWLERFPQYKTRDFFIAGESYAGHYVPQLAQHILSKNKKRKNHKVINLKGITVGNGWIDDNYCTKGMYDYYWMAGLNSDETHEGIQKLCDFRNFNVTNECIGYENRATDELGDIDVYNIYAPLCNSSSTTKNVASYSVSDFDPCAEDYTIAYLNLPEVQEALHVKPTKWSPCSDLSWTDSPSSILPTINRLISSGISIWLYSGDIDGRVPITSTKYSINSLKLPVHTAWRPWYIGKEVGGYVIGYKGLTLVTVRGAGHMVPSDQPQRALAMISSFLIGKLPPKLNS*	491

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g5822	490	Pfam	Serine carboxypeptidase	83	480	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	22	-	-
	Mal1g5822	490	PANTHER	CARBOXYPEPTIDASE	25	484	-	-
	Mal1g5822	490	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	25	484	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	Gene3D	-	348	379	-	-
	Mal1g5822	490	SUPERFAMILY	alpha/beta-Hydrolases	77	484	IPR029058	-
	Mal1g5822	490	ProSitePatterns	Serine carboxypeptidases, serine active site.	220	227	IPR018202	GO:0004185
	Mal1g5822	490	Gene3D	alpha/beta hydrolase	71	340	IPR029058	-
	Mal1g5822	490	PRINTS	Carboxypeptidase C serine protease (S10) family signature	160	172	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	PRINTS	Carboxypeptidase C serine protease (S10) family signature	452	465	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	PRINTS	Carboxypeptidase C serine protease (S10) family signature	173	183	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	PRINTS	Carboxypeptidase C serine protease (S10) family signature	206	231	IPR001563	GO:0004185\|GO:0006508
	Mal1g5822	490	ProSitePatterns	Serine carboxypeptidases, histidine active site.	452	469	IPR033124	GO:0004185
	Mal1g5822	490	Gene3D	-	388	482	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g5822	Mal-Chr1	135730596	135734933	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g5822	356	483	Calmodulin-binding Proteins	AT2G22960	30.827	1.96e-12	64.3

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g5822	1	135730596	135734933	Mal1g5822	1	135730596	135734933	ECH