Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5795 ATGTCTGTTAGGAGTGAACACCATCAAACGGTTCCACTTTCGGTTCTATTGAAGCGGGAGTTGATGAGCGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCTGGACAAAGCAAGAAAGGAGAGGATTTCACGTTGTTAAAGTCCGATTGCCAGAGGATGGTTGGTGATGGGGTCTGTACATATTCTGTTTTTGGGCTATTTGACGGACACAATGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTAAATAATGTTGTTAGTGCAATTCCTCCAGATCTTAACAGAGATGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTGCACAGAAAGGACAAAAATCAGGAACAACTGTCACCTTTGTGATTATTGAAGGATGGGTTGTGACGGTTGCATCAGTTGGCGATTCCCGTTGCGTGCTAGAATCTTCTGAAGGTGGGATTTATTACCTGTCAGCTGATCATAGGCTAGAAACAAATGAAGAAGAGAGGGTTCGTATCACTTCTAGCGGCGGTGAGGTTGGTCGTTTAAATACAGGGGGAGGTGCAGAGGTTGGTCCTTTGAGGTGTTGGCCCGGTGGTTTGTGCCTTTCACGATCTGTTGGAGATATGGATATTGGAGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGCTGTCCACCGCTGGAGGCCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCTTTACCTGCAGAAGTGGCCCTTGATTGTTGTCGTGGCATGTCAGCAGAGTCTGCTGCACCACAGATTGTAAAAGAAGCTTTACAAGCAAAGGGACTTAGAGATGATACAACCTGTATCGTTGTCGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTACCACACCAAAAGAAGCCAGTAAAAGGAATGCTCAAGGCCATGTTTCGTAAAAAATCTTCGGAATCATCTTCTTATATTGACAAAGAATACTTGGAGCCAGATGTGGTAGTGGAGCTGTATGAGGAAGGCTCTGCCATGCTTTCAGAGAGGTTAGAAACAAAATATCCACTATGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACATGAGGGTGCAGACAACCCTCAAAAAGTGCGCCCCTGGGATGGACCTTTCCTTTGCTTTAGTTGTCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCATTAGATAGACTTAGTAGTGGAAGTGACGAATGA 1290 0.4403 MSVRSEHHQTVPLSVLLKRELMSEKIEKPEIVHGQAGQSKKGEDFTLLKSDCQRMVGDGVCTYSVFGLFDGHNGSAAAIYSKENLLNNVVSAIPPDLNRDEWLAALPRALVAGFVKTDKDFAQKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSVGDMDIGEFVVPVPYVKQVKLSTAGGRLVICSDGVWDALPAEVALDCCRGMSAESAAPQIVKEALQAKGLRDDTTCIVVDILPQEKPPAPVPHQKKPVKGMLKAMFRKKSSESSSYIDKEYLEPDVVVELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISVHEGADNPQKVRPWDGPFLCFSCQEKKEAMEGKRSLDRLSSGSDE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5795 429 ProSiteProfiles PPM-type phosphatase domain profile. 45 294 IPR001932 -
Mal1g5795 429 SUPERFAMILY PP2C-like 32 294 IPR036457 -
Mal1g5795 429 Gene3D - 32 300 IPR036457 -
Mal1g5795 429 PANTHER ALPHABET, ISOFORM E-RELATED 6 423 - -
Mal1g5795 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 6 423 - -
Mal1g5795 429 Pfam Protein phosphatase 2C 58 282 IPR001932 -
Mal1g5795 429 CDD PP2Cc 37 294 IPR001932 -
Mal1g5795 429 SMART PP2C_SIG_2 39 294 IPR001932 -
Mal1g5795 429 SMART PP2C_4 22 292 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5795 Mal-Chr1 135193198 135197583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5795 1 428 PP2C-type Phosphatase Gene Family AT1G47380 77.156 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5795 1 135193198 135197583 Mal1g5795 1 135193198 135197583 ECH
Mal1g5795 1 135193198 135197583 Mal2g1210 2 14215829 14220012 PCT