Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5793 ATGCAAGCTTGGGGGAGGTTAGGAGGTTACATAAGACGTGGTGTATGCAGTTTTTCCGGGCCGTTTCTTCCGTTTGGTGGCGCGGTTGATATAATTGTTGTTCAACAGAAAGATGGGAGCTTTAAATCATCACCTTGGTATGTTAGGTTTGGGAAATTTCAAAGGGTTATGAAGGCGGCGAAAAGGGAAAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAAACTGATTTTCATATGTGTTTGAATCCTAAAGGGGAAGCTTTTTTTCTTCATGCAAATAACCAACATAGTGAAGAAGAGGAATTAGAAGAACAAGAGGAACGAGAATTAGTAGAAGACGATGAAGGAGACACTATGTTGTCTTATGATGATATTCAACTTAGAGGTAGTAATAAGAGGCAATTCAAGTCCAAAAGTTGTAATTTTGGTTCAGATGATCGTGTTGTAGCTACAAATGATTCTCGGAATTCAAGAATATATAGACCTGTATTTGGGCCGAGGTCCGGTGGTGGTGGTGGTGATGATGGTGATGCAGATTCAGTGGAACGGGCTGAGGTTGCAGCCAAGTTGTTGGATTTGAGGTGGTCTACAAATCTCTCTTTTGATGAACTTCCTCATACCGAAAGAAAGAAAACTAGGGGTGTTAGCTTGGATAAGGAGAAAGTCAAGTTTGAATCCGGCGAGGTTTTGCACACTGCAACTATGCGGCTACCCAAGGGTGGAAAAACTGAGGGAGTGATTAAGGGTGTTGATCTAGAGATGCTGGTAACGGATTGTGGTAATTGTGATGTTGCGGATGTTGGAAGCATAGCAAAGTTTCAAAAATCTCGAACGGTCAATATCGGGCGAAGGGATTGTTCTGTTAAGAAGGTCAGCGTAAATACTCCAACATCTGAACAACTGTCGTCGCTGAATCTGAAGGAAGGGAGGAACACAATAACCTTTTGTTTCTCTACACCTATGATGGGAAAGAGGCAGATTGATGCTCGAATATTTTTGTGGAAGTGGAATACTCGTATAGTGATATCAGATGTGGATGGGACAATTACAAGGTCAGATGTTTTAGGTCAATTCATGCCTTTAGTAGGGATTGACTGGTCACAGTCAGGTGTTGCTCATTTATTTTCAGACATCAAGGAAAATGGCTACCAGATACTTTTTCTCAGTGCTCGTGCAATTTCTCAGGCACATCACACCAGACAATTCCTACTCAACCTTAACCAGGACGGAAAAGTCTTACCAGATGGTCCTGTTGTTATTTCCCCCGACGGACTTTTTCCTTCTCTATATAGAGAAGTTATCCGCAGGGCTCCTCACGAGTTCAAAATTGCTTGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTCCAATCCCTTCTATGCTGGTTTTGGAAATAGAGATACTGATGCAATCAGCTACCTTAAGGTTGGAATCGCAAAAGGAAAAATATTCATTATTAATCCCAAGGGCGAGATTTCTGTAAACCAACGTTGTTTAGACACAAGATCATACACTTCTCTTCATGCTCTTGTGAATGGAATGTTCCCTCCTACAGACTCATCTGAGCAGGAGGATTTCAATTCATGGAATTTCTGGAAGTTGCCCTCTTTCTAA 1620 0.4173 MQAWGRLGGYIRRGVCSFSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFQRVMKAAKREKVKVSVSVNGVETDFHMCLNPKGEAFFLHANNQHSEEEELEEQEERELVEDDEGDTMLSYDDIQLRGSNKRQFKSKSCNFGSDDRVVATNDSRNSRIYRPVFGPRSGGGGGDDGDADSVERAEVAAKLLDLRWSTNLSFDELPHTERKKTRGVSLDKEKVKFESGEVLHTATMRLPKGGKTEGVIKGVDLEMLVTDCGNCDVADVGSIAKFQKSRTVNIGRRDCSVKKVSVNTPTSEQLSSLNLKEGRNTITFCFSTPMMGKRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQSGVAHLFSDIKENGYQILFLSARAISQAHHTRQFLLNLNQDGKVLPDGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPPDSNPFYAGFGNRDTDAISYLKVGIAKGKIFIINPKGEISVNQRCLDTRSYTSLHALVNGMFPPTDSSEQEDFNSWNFWKLPSF* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5793 539 PANTHER GH19076P 1 212 - -
Mal1g5793 539 PANTHER GH19076P 276 538 - -
Mal1g5793 539 Pfam lipin, N-terminal conserved region 25 100 IPR007651 -
Mal1g5793 539 PANTHER LIPIN 1 212 IPR026058 -
Mal1g5793 539 PANTHER LIPIN 276 538 IPR026058 -
Mal1g5793 539 SUPERFAMILY HAD-like 334 481 IPR036412 -
Mal1g5793 539 MobiDBLite consensus disorder prediction 100 116 - -
Mal1g5793 539 MobiDBLite consensus disorder prediction 160 180 - -
Mal1g5793 539 SMART lns2 341 497 IPR031315 -
Mal1g5793 539 MobiDBLite consensus disorder prediction 96 116 - -
Mal1g5793 539 Pfam LNS2 (Lipin/Ned1/Smp2) 296 518 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5793 Mal-Chr1 135173314 135178313 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5793 1 135173314 135178313 Mal1g5793 1 135173314 135178313 ECH
Mal1g5793 1 135173314 135178313 Mal2g1208 2 14194376 14200493 PCT