Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5784 ATGCTCCTTGAGAGAATGCCATCACAAGGTAAGGGAGAAAATAGCATAAAAATGAAAGCTGTATTGGAAGAATTGCCAAAAGCAAAATCATGGAACGCAAAGAAGAATGGAACAAAGATAGAAGTACCAAGTTTTTTAGGCGAAAAAATGGGTAAAGGAATGAAGATAGGAATGGTGAACATTAACGAAGACGACGATGTAAGCGAATGGAACAAACATGGAGAAACAATACCAATTAATTTCGACAAAGTGTCACAATTTTTCAACTGGACAGATTTATTTCCCGAATGGATCGATGAAGAAGAAGAAAGCGACGTCCCAACATGTCCCGAGTTACCAATGCCGGAAGTCGCAACATATGAAAACATGGACATAATAGTAGCAAAGTTACCATGCAATTATCCATTAGAAGGGTGGGGAAGGGAAGTTTTAAGGTTACAAGTTCATCTTATTGTGGCAAATATGATTGTGAAGAAAGGAAAAAAGGATTGGAAATGGAAGAGCAAGGTTGTGTTTTGGAGTAAGTGTAGACCAATGTTGGAGATTTTTAGATGTGATGATTTGGTTAAACATGAAGGTGATTGGTGGTTTTTTGAAGTTGATGTAAAGAAGTTGGAGCAAAAAGTTTCTTTGCCTGTTGGGTCTTGTAATTTGGCTTTGCCTCTATGGGAACAAGGGATCGACAAGGTATACGACATATCCAAAATGGAACAAAACGTAAGAAGCAAAACAAGAGCAAAACATGAAGCCTATGCAACAGTACTACATTCCTCAGAAAGCTATGTTTGTGGAGCAATAACACTTGCACAAAGCCTCCTAAAAACAGGAACCAAACGTGACCTTATACTTCTCATCGACAGCTCCATCTCCGTCCGCAAACGCCGCGCGCTTTCTGCGGCCGGTTGGAAGATTCGAACCATCACCCGAATCCGAAACCCGAGAGCGGAAAATGGAACTTATAATGAGTACAATTATAGTAAGTTTCGGTTGTGGCAACTTACGGATTATGAGAAAATTATATTTATAGATTCTGATATTGTTGTGTTGAGGAATCTTGATATTCTCTTCAACTTCCCTCAAATGTCTGCCACTGGGAATGATCAATCCATTTTCAACTCTGGCATCATGGTTATTGAGCCTTCCAATTGCACCTTCAGTGTGCTTATGAGCCGGCGCCACGACATTGTATCATACAACGGAGGAGATCAAGGGTTCCTAAATGAGATATTTGTGTGGTGGCATAGGCTTCCAAGGAGGGTAAACTATTTAAAGAATTTTTGGGCAAACACAACAGTAGAAGCAAGTGTGAAAAATGGTTTATTTGGTGCTGACCCTCCAAAACTATATGCTATTCACTACCTTGGTTTGAAACCTTGGCATTGCTATAGAGACTATGATTGCAATTGGGATGTGGTGGATCAAAGAGTTTATGCTAGTGATGTGGCACACCAACGTTGGTGGAATTTTCATGATAAAATGGACAAGAAGTTACAAAGTTTTTGTAGGTTGACAAGACAACGTAGGACTGAGTTGAATTGGGAAAGAAGAAGATCTAATAAGATGGGATCACTTGATTATCATTGGAAGATTAATGTCACTGATCCTAGAAAATCTGGATCTCTTTTGATGGACTAA 1635 0.3939 MLLERMPSQGKGENSIKMKAVLEELPKAKSWNAKKNGTKIEVPSFLGEKMGKGMKIGMVNINEDDDVSEWNKHGETIPINFDKVSQFFNWTDLFPEWIDEEEESDVPTCPELPMPEVATYENMDIIVAKLPCNYPLEGWGREVLRLQVHLIVANMIVKKGKKDWKWKSKVVFWSKCRPMLEIFRCDDLVKHEGDWWFFEVDVKKLEQKVSLPVGSCNLALPLWEQGIDKVYDISKMEQNVRSKTRAKHEAYATVLHSSESYVCGAITLAQSLLKTGTKRDLILLIDSSISVRKRRALSAAGWKIRTITRIRNPRAENGTYNEYNYSKFRLWQLTDYEKIIFIDSDIVVLRNLDILFNFPQMSATGNDQSIFNSGIMVIEPSNCTFSVLMSRRHDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTVEASVKNGLFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVVDQRVYASDVAHQRWWNFHDKMDKKLQSFCRLTRQRRTELNWERRRSNKMGSLDYHWKINVTDPRKSGSLLMD* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5784 544 CDD GT8_Glycogenin 249 493 - -
Mal1g5784 544 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 498 IPR029044 -
Mal1g5784 544 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 16 537 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Mal1g5784 544 Pfam Glycosyl transferase family 8 254 460 IPR002495 GO:0016757
Mal1g5784 544 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 247 498 IPR029044 -
Mal1g5784 544 PANTHER GLYCOGENIN SUBFAMILY MEMBER 16 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5784 Mal-Chr1 135026807 135031245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5784 36 543 Glycosyltransferase AT4G33330 69.141 0.0 757