Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5761 ATGGCTGGTTCTTCTGATGATGATATACACCAAACACACCCATCACTGGTTCCTCCTGATTCCCAAGATTTTTCCAATTTATTCAACCAACTCATGGATCCATCTTCTTCATCATCTTTCAATTTTTCTGATCCATATCCTAATCCTTCCACCATCTCTTACCCTCCTCATCATCCTTCTCATTTCACTTCATCTTCTTCTGTTCAGAATGATGAGGGTTCAGAGTTGCCATCATCAAAGGCTGCCCCACCACCACGTTCTTCTTCAAAGAGAAGCAGAGCTGCAGAGTTCCATAATTTGTCTGAAAAGAGAAGAAGGAGTAAGATTAACGAGAAATTAAAAGCCTTGCAGAATTTAATTCCAAATTCTAACAAGACAGACAAAGCTTCAATGCTAGATGAGGCTATAGAATATTTGAAGCAGCTTCAGCTTCAAGTGCAAATGTTAATGGTGAGAAATGGTTATAGCTTGCATCCAATGTCTTTATCGGGAGGACCGCGACCTACAATGTTTTCTCAGGCTGAGTTCTTTAACCTTGATGAGGGTGATAATGGATTTCACAATTCTAACAATGCAATTACCCCATCTGCTAACAACGAATGTTTCGCACGACAAGCTTTTAGTTTTCCAGAACAATGCAGCATCTCAAATCAATCTGTTATCATACCCTCGGCGACAAATATAGCTTCATTTGATACCTCATCAAGTTTTCAAACCTCTATTAAGGATAATTTCTGCAACAACATGCCACAACTGATTTTGGATACAACAAGGATTGGAAAAACTCCTTCTTCAGATGTGTCTTAA 807 0.3903 MAGSSDDDIHQTHPSLVPPDSQDFSNLFNQLMDPSSSSSFNFSDPYPNPSTISYPPHHPSHFTSSSSVQNDEGSELPSSKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMVRNGYSLHPMSLSGGPRPTMFSQAEFFNLDEGDNGFHNSNNAITPSANNECFARQAFSFPEQCSISNQSVIIPSATNIASFDTSSSFQTSIKDNFCNNMPQLILDTTRIGKTPSSDVS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5761 268 SMART finulus 99 148 IPR011598 GO:0046983
Mal1g5761 268 PANTHER TRANSCRIPTION FACTOR SPATULA 59 244 - -
Mal1g5761 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 153 IPR036638 GO:0046983
Mal1g5761 268 CDD bHLH_AtPIF_like 93 155 - -
Mal1g5761 268 Gene3D - 88 152 IPR036638 GO:0046983
Mal1g5761 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Mal1g5761 268 MobiDBLite consensus disorder prediction 1 48 - -
Mal1g5761 268 MobiDBLite consensus disorder prediction 1 107 - -
Mal1g5761 268 MobiDBLite consensus disorder prediction 55 86 - -
Mal1g5761 268 Pfam Helix-loop-helix DNA-binding domain 97 143 IPR011598 GO:0046983
Mal1g5761 268 MobiDBLite consensus disorder prediction 91 107 - -
Mal1g5761 268 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 59 244 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5761 Mal-Chr1 134689992 134692403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5761 93 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 84.722 1.60e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g5761 HLH 1.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5761 1 134689992 134692403 Mal1g5761 1 134689992 134692403 ECH