Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5756 ATGAAGGTGCATCAATTCACACGTGGATTTTGGGAGCATGAACAACCTTCCCTCACACTTGGGTGCAAGCGTTTACGTCCTCTTGCACCTAAAATTTCTTCTAATAACACCGATAATTCTACTACTAACACCCCTTCTCTTTCTTTTGATCTCAAGAGTTTCATTAGACCCGAAAGTGCTTCCAGAATTACTCTTGCTTCTTCTGATGATAACAAGAAAGATCCACCTTCACCACAAAGCCAGGTTGAAACGCATATTCCAGGAGGAACAAGGTGGAATCCAACACAAGAACAAATAGGAATATTGGAGATGTTATACAGAGGTGGAATGAGAACACCAAATGCACAACAAATAGAACAGATCACAGTTCAACTTAGCAAGTACGGTAAAATTGAAGGGAAAAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGTAACAGTCTTGGCCTTCCTCATAGTCCTCGAACTCCTACCACAACACTTGTGTCCCCCACCTTTAGTACTATTACAACTTTGGACACCCCCAAAAGGGGGGAAGTTATGGAAAGAAATCAAGAAGATAGTCCATTGAAGAAGAGTAGGAGTTGGCCATTTGAGTACTTGGAAGAGAAAAATTGGTCAATATGCAAAGTAGAGGAACATAAAACTCTAGAGCTTTTCCCATTACACCCGGAAGGCAGATGA 708 0.4153 MKVHQFTRGFWEHEQPSLTLGCKRLRPLAPKISSNNTDNSTTNTPSLSFDLKSFIRPESASRITLASSDDNKKDPPSPQSQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPTTTLVSPTFSTITTLDTPKRGEVMERNQEDSPLKKSRSWPFEYLEEKNWSICKVEEHKTLELFPLHPEGR* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5756 235 MobiDBLite consensus disorder prediction 65 94 - -
Mal1g5756 235 CDD homeodomain 90 151 IPR001356 GO:0003677
Mal1g5756 235 MobiDBLite consensus disorder prediction 184 202 - -
Mal1g5756 235 Pfam Homeodomain 90 149 IPR001356 GO:0003677
Mal1g5756 235 MobiDBLite consensus disorder prediction 148 202 - -
Mal1g5756 235 SUPERFAMILY Homeodomain-like 89 156 IPR009057 -
Mal1g5756 235 SMART HOX_1 87 154 IPR001356 GO:0003677
Mal1g5756 235 Gene3D - 89 156 - -
Mal1g5756 235 MobiDBLite consensus disorder prediction 155 182 - -
Mal1g5756 235 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 235 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Mal1g5756 235 ProSiteProfiles 'Homeobox' domain profile. 95 150 IPR001356 GO:0003677
Mal1g5756 235 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5756 Mal-Chr1 134611908 134613210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5756 1 156 Wox Gene Family AT1G46480 64.417 4.53e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal1g5756 Homeodomain 1.5e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5756 1 134611908 134613210 Mal1g5756 1 134611908 134613210 ECH