Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5752 ATGGAAGAAGATAGGGAATATTGTTGTTCTATGAATTCAAGAACCAATAGCCCTATGGCTATAGATAATAATATCAACAACAATAAGGGTATGAAAAAAGAGAAAAAAGCTATGAAACCATATAGAGGAATAAGGATGAGAAAGTGGGGTAAGTGGGTGGCAGAGATTAGAGAACCAAACAAGAGATCAAGAATTTGGTTAGGTTCTTACATAACACCTATTGCTGCCGCACGTGCCTATGACACAGCTGTGTTCTATCTTAGAGGTCCTTCAGCACACCTTAATTTTCCTGAATTATTGTTCAAAGATCAACAAGAAGATGAAGAAAATCTACAACAACATGGGAATATGTCGGCTGATTCAATAAGGAAAAAAGCTACACAAGTTGGTGCTAGAGTTGATGCTCTTGAAACTAATTCTCTAATTAATCATCATGCTTCTTCCAATAATCATCATGATCACTCTAATTCTTCTTTTACTTCTCTCAAACCTGACTTGAATGAGTTTCCAAAACCTGAAGATTGTTGA 528 0.358 MEEDREYCCSMNSRTNSPMAIDNNINNNKGMKKEKKAMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYITPIAAARAYDTAVFYLRGPSAHLNFPELLFKDQQEDEENLQQHGNMSADSIRKKATQVGARVDALETNSLINHHASSNNHHDHSNSSFTSLKPDLNEFPKPEDC* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5752 175 MobiDBLite consensus disorder prediction 145 164 - -
Mal1g5752 175 Pfam AP2 domain 41 89 IPR001471 GO:0003700|GO:0006355
Mal1g5752 175 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Mal1g5752 175 MobiDBLite consensus disorder prediction 145 175 - -
Mal1g5752 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 174 - -
Mal1g5752 175 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Mal1g5752 175 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700|GO:0006355
Mal1g5752 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 12 174 - -
Mal1g5752 175 Gene3D AP2/ERF domain 40 98 IPR036955 GO:0003700|GO:0006355
Mal1g5752 175 MobiDBLite consensus disorder prediction 106 126 - -
Mal1g5752 175 SUPERFAMILY DNA-binding domain 40 98 IPR016177 GO:0003677
Mal1g5752 175 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Mal1g5752 175 CDD AP2 41 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5752 Mal-Chr1 134581032 134581559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5752 30 174 AP2-EREBP Transcription Factor Family AT2G23340 56.000 3.32e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal1g5752 AP2 4.3e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5752 1 134581032 134581559 Mal1g5752 1 134581032 134581559 ECH