Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5735 ATGGATTCCACTACTCTCTCTCCAGCCATGAAACTCATGATCATCCTCATCTTATCCACCTTCACAGTTTCACTAGCCCTAGACATGTCGATCATCTCCTACGACAAAACCCACCCAGACAAATCAACAAGCCAAAGAACCAACAAAGAAGTATTGACTATGTACGAAGAGTGGTTAGTGAAACATGGAAAATCATACAACGGTTTAGGTGAGAAAGATAAAAGGTTCGAGATCTTCAAAGACAATCTTAACTTCATCGATGAACATAACAAACTGAACTTGACCTATAGATTAGGTTTGAACCGGTTCGCGGATCTGACCAACGAAGAGTACAGAAGCAAGTTTTTGGGAACTAAGATCGATCCAAACCGTAGGATTAAGAAGGCGGGTTCACGGAGCAATAGATATGTGCCACGTGTCGGTGACAAATTGCCTGAGTCTGTTGATTGGAGAAAGGAAGGAGCTGTTGTTGGAGTAAAAGACCAAGAAAGTTGTGGGAGTTGTTGGGCATTCTCAGCAATCGCTGCGGTGGAAGGAATAAATAAGATAGTGACAGGAGATCTAATTTCACTGTCAGAACAAGAACTGGTGGACTGTGATACATCGTATAACGAAGGATGCAATGGTGGACTTATGGACTACGCCTTCGATTTCATCATCAATAATGGTGGCATTGACTCTGAAGAGGATTACCCTTACAAGGGTGTTGATGGTAGATGTGACCAGAACAGGAAAAATGCTAAAGTTGTTACAATTGATGACTATGAAGATGTTCCTGCCTATGATGAATTGGCCTTGCAAAAGGCTGTTGCAAATCAAGTTATCGCCGTTGCTATTGAAGGTGGCGGTAGGGAATTCCAATTATATGAATATGGTGTATTTACCGGTAGATGTGGAACAGCACTAGACCATGGTGTTGCAGCTGTTGGATACGGTAAAGAAAAAGGTAAAGATTATTGGATTGTTAGGAATTCATGGGGACCAAACTGGGGAGAAGAAGGCTACATCAGACTAGAACGTAATCTTGCTTCAAGCAGATCAGGAAAGTGTGGAATTGCGATCGAGCCATCGTATCCAATTAAGAATGGACAGAATCCCCCTAACCCTGGACCATCACCACCTTCACCTGTGAAGCCACCATCTGTCTGTGACGAATACTATAGCTGTGCTGAAGGCTCTACTTGTTGCTGTATTTATGAGTATGGAAGATCTTGCTTTGAGTGGGGATGCTGTCCTCTTGAGTCTGCTACTTGCTGCGACGATCACTACAGTTGCTGCCCTCACGAGTATCCTGTCTGTGACACTTATGCTGGACTTTGTCTTAAGGGCAAGAACAACCCATTAGGAGTGAAATCATTCAAAAGAACTCCCGCTAAGCCTCACTGGGCCTTTGGAGGTAAGAACAAGATGAGCCGCGCTTAA 1422 0.436 MDSTTLSPAMKLMIILILSTFTVSLALDMSIISYDKTHPDKSTSQRTNKEVLTMYEEWLVKHGKSYNGLGEKDKRFEIFKDNLNFIDEHNKLNLTYRLGLNRFADLTNEEYRSKFLGTKIDPNRRIKKAGSRSNRYVPRVGDKLPESVDWRKEGAVVGVKDQESCGSCWAFSAIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDSEEDYPYKGVDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQVIAVAIEGGGREFQLYEYGVFTGRCGTALDHGVAAVGYGKEKGKDYWIVRNSWGPNWGEEGYIRLERNLASSRSGKCGIAIEPSYPIKNGQNPPNPGPSPPSPVKPPSVCDEYYSCAEGSTCCCIYEYGRSCFEWGCCPLESATCCDDHYSCCPHEYPVCDTYAGLCLKGKNNPLGVKSFKRTPAKPHWAFGGKNKMSRA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5735 473 CDD Peptidase_C1A 145 359 IPR039417 -
Mal1g5735 473 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 319 338 IPR025661 -
Mal1g5735 473 SMART GRAN_2 383 440 IPR000118 -
Mal1g5735 473 SUPERFAMILY Granulin repeat 380 414 - -
Mal1g5735 473 PANTHER CYSTEINE PROTEASE 36 389 - -
Mal1g5735 473 Gene3D Granulin 380 443 IPR037277 -
Mal1g5735 473 Pfam Cathepsin propeptide inhibitor domain (I29) 55 111 IPR013201 -
Mal1g5735 473 Pfam Papain family cysteine protease 144 360 IPR000668 GO:0006508|GO:0008234
Mal1g5735 473 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 162 173 IPR000169 -
Mal1g5735 473 PRINTS Papain cysteine protease (C1) family signature 319 325 IPR000668 GO:0006508|GO:0008234
Mal1g5735 473 PRINTS Papain cysteine protease (C1) family signature 162 177 IPR000668 GO:0006508|GO:0008234
Mal1g5735 473 PRINTS Papain cysteine protease (C1) family signature 304 314 IPR000668 GO:0006508|GO:0008234
Mal1g5735 473 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 36 389 - -
Mal1g5735 473 Pfam Granulin 394 441 IPR000118 -
Mal1g5735 473 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 302 312 IPR025660 -
Mal1g5735 473 Gene3D Cysteine proteinases 36 362 - -
Mal1g5735 473 SUPERFAMILY Cysteine proteinases 47 360 IPR038765 -
Mal1g5735 473 SMART Inhibitor_I29_2 55 111 IPR013201 -
Mal1g5735 473 SMART pept_c1 144 360 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5735 Mal-Chr1 134204098 134208554 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5735 1 134204098 134208554 Mal5g3633 5 103132775 103136496 ECH
Mal1g5735 1 134204098 134208554 Mal1g0483 1 5588406 5591202 ECH
Mal1g5735 1 134204098 134208554 Mal1g5735 1 134204098 134208554 ECH
Mal1g5735 1 134204098 134208554 Mal2g1180 2 13820130 13826713 PCT