Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5732 ATGGGCCAAGCAGCTTCCACGGCTGCCGGAACCAACCGCCGGGAAAGCTTACACGGTAACCGATCTGCTTCCACCGCAAAAACAACCAGATCAACTGCCTTGGTTTCTCCGATGATCTCCACCGATGGAGACGATGTTACAGATCGGGTTGACGGTGACGGTGGCGGTGAATTCTCCGATTATATATCAGATCTACCTGATGAGTGTTTAGCGATTGTGTTTCAGTCGTTGAATCCTTCCGATCGGAATCAGTGTTCACTCGTTTGCCGGCGGTGGCTGCACGTGGAGGGACAGAGTCGTCAACGGCTTTCGTTGAACGCGAAGCTCGATCTTCTTCCGGTAATTCCTTCTCTGTTTAATCGATTTGATTCAGTGACGAAATTAGCGTTGAAGTGTGATCGTAGATCTGTGAGTATTAGAGATGAAGCGCTTGTGATAATCTCCGAGCGTTGTCCTAATCTCACGCGCCTGAAGCTGCGCGCGTGTCGTGAACTAACGGATGCAGGAATGGAAGCTTTTGCGAAGAATTGTAAGGGATTGAAGAAGTTATCGTGTGGATCTTGTACTTTTGGATCTAAAGGTATGAACGCGGTGCTTGAAAATTGCGCAGCGCTCGAGGAATTATCGGTGAAGCGGCTTAGGGGAATTGCGGAGACTGCAGTGGCGGAGCCGATTGGACTGGGTGTAGCCGCGGCATCGCTGAAGACGATTTGTTTGAAGGAGCTTTATAATGGACAGTGTTTTGGTTCGTTGATTTTAGGTGCTAAGAATTTGAAGACTTTGAAGCTTTTTCGATGTTCCGGTGATTGGGATACACTTTTTACGCTTATGGCGGAACGAGTGAAGAGTATGATTGTTGAGGTTCATTTTGAGAGGCTTCAGATTAGTGATATTGGATTACAAGCTATTTCGAATTGCTCGAATTTGGAGATTTTGCATCTTGTTAAGACACCTGAGTGCACTGATATGGGACTTGTTGCGATCGCGGAACGTTGTAAGTTGTTAAGGAAGCTTCATATTGATGGGTGGAAGGCGAATCGGATTGGTGATGAAGGGTTAATAGCGGTTGCGAAGTTTTGCCCTAATTTGCAAGAATTGGTGCTTATTGGGGTTAACCCTACGAAAGCAAGTTTGGAAATGTTGGCGTCGAATTGCCCTAATCTAGAGAGGTTGGCATTGTGTGCAAGTGATACTGTTGGTGATCCTGAGATATCTTGCATTGCTGCAAAGTGTTTGGCTTTGAAGAAACTTTGCATTAAGAGTTGTCCTGTATCTGATCATGGGATGGAAGCTTTGGCAAATGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGTGTTACTCCCGAAGGCGGGGATTGGTTGAGACTCACTAGGGTTTCAGTTGCTGTTAATTTGGATGCCGTGGAAGCGGAACTTCAAGATGCTAGTGCTAGCGATGGTGGAGCACAAGACAATGGTATAGAGTTTCCTCCAATGCCGGGCTGCACATCAGCATCTACATCGGCGAATATTGCATCGAGAAGTACTATTCGATCAAGTTCATTCAAGCAAAGGTTCGGGATTTTGTCCAGGAAGAAAATAGTTGCTAGCACTTTGAGAAGATGGTCAGGTGGTAGCACTAGTGCCCGCCATGGTTAG 1650 0.4648 MGQAASTAAGTNRRESLHGNRSASTAKTTRSTALVSPMISTDGDDVTDRVDGDGGGEFSDYISDLPDECLAIVFQSLNPSDRNQCSLVCRRWLHVEGQSRQRLSLNAKLDLLPVIPSLFNRFDSVTKLALKCDRRSVSIRDEALVIISERCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLENCAALEELSVKRLRGIAETAVAEPIGLGVAAASLKTICLKELYNGQCFGSLILGAKNLKTLKLFRCSGDWDTLFTLMAERVKSMIVEVHFERLQISDIGLQAISNCSNLEILHLVKTPECTDMGLVAIAERCKLLRKLHIDGWKANRIGDEGLIAVAKFCPNLQELVLIGVNPTKASLEMLASNCPNLERLALCASDTVGDPEISCIAAKCLALKKLCIKSCPVSDHGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRLTRVSVAVNLDAVEAELQDASASDGGAQDNGIEFPPMPGCTSASTSANIASRSTIRSSSFKQRFGILSRKKIVASTLRRWSGGSTSARHG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5732 549 Pfam F-box domain 62 93 IPR001810 GO:0005515
Mal1g5732 549 Pfam Leucine Rich repeat 151 174 IPR001611 GO:0005515
Mal1g5732 549 Gene3D - 61 95 - -
Mal1g5732 549 Gene3D Ribonuclease Inhibitor 96 478 IPR032675 -
Mal1g5732 549 MobiDBLite consensus disorder prediction 1 47 - -
Mal1g5732 549 PANTHER F-BOX PROTEIN SKIP2 43 473 - -
Mal1g5732 549 MobiDBLite consensus disorder prediction 1 38 - -
Mal1g5732 549 SMART LRR_CC_2 385 410 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 332 359 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 360 384 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 151 176 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 436 463 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 202 227 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 411 435 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 177 201 IPR006553 -
Mal1g5732 549 SMART LRR_CC_2 306 331 IPR006553 -
Mal1g5732 549 ProSiteProfiles F-box domain profile. 59 92 IPR001810 GO:0005515
Mal1g5732 549 PANTHER UNCHARACTERIZED 43 473 - -
Mal1g5732 549 SUPERFAMILY RNI-like 112 465 - -
Mal1g5732 549 SUPERFAMILY F-box domain 59 95 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5732 Mal-Chr1 134172895 134174544 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5732 1 134172895 134174544 Mal1g5732 1 134172895 134174544 ECH