Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5721 ATGGAACCAAAGAGCGTTAACCCCACGCGCCGCCCTCAACGTGAAGCAAAGAAAAAAGCCGTTGCTGCACTATGCGAACAACAACGCAAAAGAAAACGCGTTCCTCTCGGTGAAATAACTAACGCTTCAAACACCAACGCAAACGACGTCGTTTTACCATCGCACAAAAAACGAAACGTCGCGAAATCTTCAAACTCCGATGAAACTCCGGTACCGGAGAAATTCGAAGATCCTCAGTTATGTGAAACCTATGTTTCTGATATTTACGATTATCTTCGTAATTTGGAGGTTGATCCTAGTAAAAGGCCATTATGTGACTACATACAGAAAGTTCAGAGGGAAATCAATGCGAATATGAGGGGTGTGCTTGTGGATTGGTTAGTTGAAGTTGCTGAAGAATACAAGCTTGTTTCGGATACGCTTTATTTTTCGGTTTCATATATCGATAGGTTTTTGTCGTTGAATGATTTGAGTAGACAGAAGTTGCAATTACTTGGTGTTTCTTCGATGTTGATTGCTTCAAAATATGAGGAGATTAAGCCACCTGAGGTTGAGGACTTTTGTTACATTACGGACAACACATACTCGAAAGAAGAGGTTTTGAACATGGAGGCTGATATTTTGAGGTCATTGAAGTTTGAATTGGGTGGTCCTACAATAAAGACATTCCTAAGAAGATTCGTCGCTAAAGTTGGTCAAGAAGGTGTTGATGCTTCCGAGTTGCAGTTTGAGTTCCTTTGCTCTTACCTTGCTGAGCTCAGTTTGTTGGATTATAACTGTGTGAGGTTCTTGCCTTCTATGGTGGCTGCATCAGTTGTATTTCTTGCACGTTTTATGTTAAGCCCGAAGACTCATCCTTGGAATTCAGCCATCCATCAACTCACCCGATATAAACCTGCTGAATTGAAGGAATGTGTTCTAAATATACATGACTTGTACCTTGGTAGGAAAGGTGGCACTTTGCAAGCTGTGCGAGATAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCCTCTCCTCCAGAGATATCTCTTTCTTTTTTTTGA 1053 0.4112 MEPKSVNPTRRPQREAKKKAVAALCEQQRKRKRVPLGEITNASNTNANDVVLPSHKKRNVAKSSNSDETPVPEKFEDPQLCETYVSDIYDYLRNLEVDPSKRPLCDYIQKVQREINANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRFLSLNDLSRQKLQLLGVSSMLIASKYEEIKPPEVEDFCYITDNTYSKEEVLNMEADILRSLKFELGGPTIKTFLRRFVAKVGQEGVDASELQFEFLCSYLAELSLLDYNCVRFLPSMVAASVVFLARFMLSPKTHPWNSAIHQLTRYKPAELKECVLNIHDLYLGRKGGTLQAVRDKYKQHKFKCVATTPSPPEISLSFF* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5721 350 CDD CYCLIN 119 208 IPR013763 -
Mal1g5721 350 SUPERFAMILY Cyclin-like 76 215 IPR036915 -
Mal1g5721 350 PANTHER CYCLINS 20 350 IPR039361 -
Mal1g5721 350 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 20 350 - -
Mal1g5721 350 MobiDBLite consensus disorder prediction 1 75 - -
Mal1g5721 350 ProSitePatterns Cyclins signature. 120 151 IPR006671 -
Mal1g5721 350 Pfam Cyclin, C-terminal domain 218 341 IPR004367 -
Mal1g5721 350 SMART cyclin_7 222 311 IPR013763 -
Mal1g5721 350 SMART cyclin_7 125 209 IPR013763 -
Mal1g5721 350 SUPERFAMILY Cyclin-like 218 343 IPR036915 -
Mal1g5721 350 Gene3D - 87 338 - -
Mal1g5721 350 Gene3D - 101 216 - -
Mal1g5721 350 MobiDBLite consensus disorder prediction 1 36 - -
Mal1g5721 350 CDD CYCLIN 218 310 IPR013763 -
Mal1g5721 350 Pfam Cyclin, N-terminal domain 87 215 IPR006671 -
Mal1g5721 350 MobiDBLite consensus disorder prediction 38 52 - -
Mal1g5721 350 PIRSF Cyclin_A_B_D_E 1 348 IPR039361 -
Mal1g5721 350 SMART Cyclin_C_2 218 342 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5721 Mal-Chr1 133964710 133967275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5721 7 350 Core Cell Cycle Gene Families AT5G43080 58.286 3.82e-144 410
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5721 1 133964710 133967275 Mal1g5721 1 133964710 133967275 ECH
Mal1g5721 1 133964710 133967275 Mal2g1159 2 13603039 13604904 PCT