Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5702 ATGGGAACAGAGAGTTACACATACATGGGAAGAAGTTTCAACGAATTCACCATCAACGACGATTCAACTTCTTCCGCTTTCAGCGACTGCAACAGTGACAGATCCGGCGAATTCGCCACCACTTCTTCTACATCCCGACGACTCCTCCTCGCCTGCGCTTCCGAAAACTCCGATGATCTCATCCGTCAACTCGTCTCGGATCTTCACTCCGATTCAATTGAAGAACAAAAACAAGCCGCCATGGAAATTCGATTACTCGCGAAGAATAAACCGGAAAATCGAATCAAAATCGCTAAAGCCGGCGCAATTAAACCGTTAATTTCGTTAGTTTCTTCACAGGACCTGCAACTTCAAGAATACGGTGTAACCGCGATTTTGAATCTATCTTTATGTGATGAGAATAAAGAGTTGATAGCTTCTTCTGGAGCGATTAAGCCGTTAGTTAGAGCTTTGAACTCCGGAACGGCGACGGCGAAGGAGAACGCGGCGTGTGCGCTTCTGAGATTATCTCAGGTGGAAGAGAACAAATCGGCGATTGGAAGATCCGGTGCAATTCCGTTACTGGTGAATCTTCTAGGAAGCGGAGGAATCCGCGGGAAGAAGGACGCGTCGACGGCTTTATATACGTTGTGTACGGTGAAGGAGAATAAGATGAGAGCGGTGAAAGCGGGGATTATGAAGGTTCTTGTTGAGTTGATGGCGGATTTTGAATCAAATATGGTGGATAAATCGGCGTATGTTGTGAGTGTATTGGTGTCGGTGTCGGAGGCGAAGGTGGCGCTGGTGGAGGAAGGTGGTGTGCCGGTGTTGGTGGAGATTGTGGAAGTTGGATCCCAGAGACAGAAGGAGATTGCGGCGGTTATTCTGTTACAGATTTGTGAGGATAGCGCGGCGGTTCGAACCATGGTGGCTCGTGAAGGTGCGATTCCTCCTTTGGTTGCTTTGACGCAGTCCGGCACCAATCGCGCAAAACAAAAGGCTGAGAAACTAATTGAGCTTCTGAGGCAACCAAGATCTACACGTACATCAGAAATGATAGCATAA 1044 0.4799 MGTESYTYMGRSFNEFTINDDSTSSAFSDCNSDRSGEFATTSSTSRRLLLACASENSDDLIRQLVSDLHSDSIEEQKQAAMEIRLLAKNKPENRIKIAKAGAIKPLISLVSSQDLQLQEYGVTAILNLSLCDENKELIASSGAIKPLVRALNSGTATAKENAACALLRLSQVEENKSAIGRSGAIPLLVNLLGSGGIRGKKDASTALYTLCTVKENKMRAVKAGIMKVLVELMADFESNMVDKSAYVVSVLVSVSEAKVALVEEGGVPVLVEIVEVGSQRQKEIAAVILLQICEDSAAVRTMVAREGAIPPLVALTQSGTNRAKQKAEKLIELLRQPRSTRTSEMIA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5702 347 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 142 184 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 172 212 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 254 294 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 213 253 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 296 336 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 131 171 IPR000225 GO:0005515
Mal1g5702 347 SMART arm_5 90 130 IPR000225 GO:0005515
Mal1g5702 347 Pfam Armadillo/beta-catenin-like repeat 91 129 IPR000225 GO:0005515
Mal1g5702 347 Pfam Armadillo/beta-catenin-like repeat 132 170 IPR000225 GO:0005515
Mal1g5702 347 Pfam Armadillo/beta-catenin-like repeat 174 211 IPR000225 GO:0005515
Mal1g5702 347 PANTHER U BOX DOMAIN-CONTAINING 5 342 - -
Mal1g5702 347 Gene3D - 177 338 IPR011989 -
Mal1g5702 347 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 101 143 IPR000225 GO:0005515
Mal1g5702 347 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 5 342 - -
Mal1g5702 347 Gene3D - 53 176 IPR011989 -
Mal1g5702 347 SUPERFAMILY ARM repeat 56 333 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5702 Mal-Chr1 133661734 133663637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5702 47 338 U-box Gene Family AT2G23140 48.322 9.25e-84 264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5702 1 133661734 133663637 Mal1g5702 1 133661734 133663637 ECH