Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5700 ATGTTGTGTGCTTGTTCCGGAGAGCAACACAAATTTGAAGAGGCACCACAGTCGCCGGATTCCCTAGCAACAAGGGATTTCTCTGCTAGTGGGTTATCTTCAAGGACTGGAGATTGGGATTCCAAACTTAATGAAAATCAAGTTGAAGATGCTGAATCTACTCTAAAAGAAGCTGCCTCATTAAACTATGAGGAAGCTAGAGCATTGTTGGGAAGGCTTGAATATCAAAGAGGGAACTTTGAAGCTGCCCTACATGTGCTTCAGGGTATTGATATCAGTACTTTGACCCCAAGGATGATCAGGGCTATTGCTGAAAGAAACAAGCTAAGAAAACCTCGGTCCAAAGCGGGTACAGTGCTTCCTAATTTGATGTCAATGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGAACTGAACCGATACACTGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATACAATTGAATCAGCTCTTCCTAATGGAATGCCGGACGGTATTGGTGAAGAATGTAAGTTAGAGGATATGTTCCACAAAGCATTAGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTGTTCTAGATGAAGCTGTCACTGCTTATCGGCTTGCTCTAGTCAAACCATGGAATTTGGAGCCAAGGAGGTTGGCCTCTCTACAAAAGGATTTAGCTACCACACTACTCTATGGTGGTGTTGAAGTAAGCCTACCTTCTCATTTGCAAGTGAGTGGTCCAACAACACCGATGAGTAACATCGAAGAAGCGATACTTTTGTTATTAATTCTATCAGGAAAGATGGCACTTCAGGAAATAGATTGGGATGCTGAAATAATTGGTCATCTTACCTTTTCGCTTTCAATTACTGGAATGTTTGAATCATTGGCAGACTGTGTAGAGCAGATCCTACCAGGTATCTTTGGTCGAGCTGATAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAAAATGAAGCAGCGTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAATCAGAGCATATGCCTCATTTTCCCTCATATTTGTTTGGTGCAAAACTGTGTTCACAATATCCAAATCATGCTCATGAAGGCATCAAATTTTCACAGCAAGTTATCGATCTAGCGAAGCATCAAAATGAGCATTTTTTGGTTCAAGGCCAACAAATTCTCGGTGTTTGTTACGGAGCTGCAGCTAGAACATCTGTAGTGGATTCCGAAAGAGTTATATTTCAAAGAGAGTCTTTGAACTTTCTAAATGTAGCTGCTCTAACTGGAAACAACGACCCCGAAGTGATATTTAGCCTTGGACTCGAAAATGCAATTCAGAGGAATCTAGATCCAGCTTATCAAAACATAATGAGGTACTCAGACATGATGGTTGGAAGTTCTACAAGAGGTTTGCAGCTGTTAGCTCTCATAGTATCTGCACAGCAGAGGTTTAAGGATGCAGAAACTATAGTTGAGTTTGCTTTAGATGACGCTGGGAGCGTAGATCAGTTAGAGCTACTTCGACTCAAAGCTATACTTCAAATTGCGCAGCAGCAACCAAAGCAAGCTATCGACACCTACAGAACCTTGTTAACAGTAATTAAAGCCAAAAAAGAGCTTTCGCTTCAAGCTAAGAGCTTTGAGTTTGATCAAGCAAAAATATTCAGGGATGAGGCATTAACGGAACAGAAATTGGAAATGGAAGCATGGCAGGATTTGGCAACCATTTATACAGATCTTAATTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCCCAATTGCTAGAGTTTTTCTCTCCCAGAAGTTGGCATATTACAGGGATGTTGTTTGAAGCTCAATCATTATACAAGGAAGCGTTTGTTTCGTTCTCAATATCATTGTCAATAGAACCTGATTATATTCCAAGTATCAATTCAACTGCGAAGTTGTTGATCAAACTTGGTATGCAATCACTTCCACTGGCAAGAAGCTTTTTAATGAATGCTTTGCGATTGGAACCCACAAACCATGACGCGTGGTTCAACCTTGGATTGGTTTCGAAAATGGAGGGTTCATTAGAACAAGCTGCAGATTGCTTTCAAGCTGCATATGAGCTGAAGCTTTCAACTCCAGTTCAAAAGTTTGAGTGA 2154 0.4118 MLCACSGEQHKFEEAPQSPDSLATRDFSASGLSSRTGDWDSKLNENQVEDAESTLKEAASLNYEEARALLGRLEYQRGNFEAALHVLQGIDISTLTPRMIRAIAERNKLRKPRSKAGTVLPNLMSMHSVSLLLEAILLKAKSLEELNRYTEAAKECRIIVDTIESALPNGMPDGIGEECKLEDMFHKALELLPNLWIKAGVLDEAVTAYRLALVKPWNLEPRRLASLQKDLATTLLYGGVEVSLPSHLQVSGPTTPMSNIEEAILLLLILSGKMALQEIDWDAEIIGHLTFSLSITGMFESLADCVEQILPGIFGRADRWYFLALCYSAAGQNEAALNLLRKACGSSESEHMPHFPSYLFGAKLCSQYPNHAHEGIKFSQQVIDLAKHQNEHFLVQGQQILGVCYGAAARTSVVDSERVIFQRESLNFLNVAALTGNNDPEVIFSLGLENAIQRNLDPAYQNIMRYSDMMVGSSTRGLQLLALIVSAQQRFKDAETIVEFALDDAGSVDQLELLRLKAILQIAQQQPKQAIDTYRTLLTVIKAKKELSLQAKSFEFDQAKIFRDEALTEQKLEMEAWQDLATIYTDLNSFLDAKACVDKAQLLEFFSPRSWHITGMLFEAQSLYKEAFVSFSISLSIEPDYIPSINSTAKLLIKLGMQSLPLARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLEQAADCFQAAYELKLSTPVQKFE* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5700 717 SUPERFAMILY TPR-like 134 531 IPR011990 GO:0005515
Mal1g5700 717 SUPERFAMILY TPR-like 45 462 IPR011990 GO:0005515
Mal1g5700 717 Gene3D Tetratricopeptide repeat domain 479 645 IPR011990 GO:0005515
Mal1g5700 717 ProSiteProfiles TPR repeat profile. 608 641 IPR019734 GO:0005515
Mal1g5700 717 Gene3D Tetratricopeptide repeat domain 646 713 IPR011990 GO:0005515
Mal1g5700 717 SMART tpr_5 678 711 IPR019734 GO:0005515
Mal1g5700 717 SMART tpr_5 608 641 IPR019734 GO:0005515
Mal1g5700 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Mal1g5700 717 SMART tpr_5 511 544 IPR019734 GO:0005515
Mal1g5700 717 SMART tpr_5 574 607 IPR019734 GO:0005515
Mal1g5700 717 PANTHER PROTEIN NPGR1 1 716 - -
Mal1g5700 717 ProSiteProfiles TPR repeat profile. 678 711 IPR019734 GO:0005515
Mal1g5700 717 Pfam Tetratricopeptide repeat 317 347 IPR019734 GO:0005515
Mal1g5700 717 MobiDBLite consensus disorder prediction 21 41 - -
Mal1g5700 717 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Mal1g5700 717 SUPERFAMILY TPR-like 564 708 IPR011990 GO:0005515
Mal1g5700 717 MobiDBLite consensus disorder prediction 5 43 - -
Mal1g5700 717 Gene3D Tetratricopeptide repeat domain 34 388 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5700 Mal-Chr1 133587233 133590926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5700 1 716 Calmodulin-binding Proteins AT1G27460 57.222 0.0 825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5700 1 133587233 133590926 Mal1g5700 1 133587233 133590926 ECH