Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5010 ATGGATAATAATAATAATAATATTCTTGGTCTTCTGAAACTTCGTATTAAAAGAGGTATTAATCTTGCAATTCGTGATTCTAATTCCAGCGACCCTTATGTTGTTGTCAACATAGGCCATGAACAGAAGTTGAAGACTCGTGTGGTGAAAAACAATTGCAACCCTGAGTGGAATGAAGAATTAACCCTTTCAATAAGGGATGTAAGAACTCCAATACATCTGACGGTTTTTGACAAAGACACTTTCTCCGTAGATGACAAAATGGGTGATGCAGATGTAGACTTGAAACCATATACTCAAAGTGTACAAATGAGATTGGACACTCTTCCAAATGGTTGTGCAATCAAGAGGGTTCAAGCAAATAGGACTAACTGCCTTGCTGAAGAGAGCAGTTGTATTTGGAAAAATGGAAAAGTCATCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGAGAATTGGTTGTGGAAATTGAATGGGTGGATGTTCCAGGTTGCAAAGGTCTATTAGGGGCACAACTTTAA 528 0.375 MDNNNNNILGLLKLRIKRGINLAIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVRTPIHLTVFDKDTFSVDDKMGDADVDLKPYTQSVQMRLDTLPNGCAIKRVQANRTNCLAEESSCIWKNGKVIQEMILRLRNVESGELVVEIEWVDVPGCKGLLGAQL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5010 175 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Mal1g5010 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 7 168 IPR044562 -
Mal1g5010 175 SMART C2_3c 11 107 IPR000008 -
Mal1g5010 175 CDD C2_ArfGAP 9 153 - -
Mal1g5010 175 Pfam C2 domain 11 101 IPR000008 -
Mal1g5010 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 7 168 - -
Mal1g5010 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 105 IPR035892 -
Mal1g5010 175 Gene3D C2 domain 5 167 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5010 Mal-Chr1 120729650 120731845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g5010 43 170 C2H2 Transcription Factor Family AT1G70790 68.462 3.94e-63 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5010 1 120729650 120731845 Mal1g5010 1 120729650 120731845 ECH
Mal1g5010 1 120729650 120731845 Mal6g3304 6 95972232 95974339 ECH