Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4736 ATGAGCAACGAATCTGAATCCGAAGTTTGTCATAATCCAATTCCACCTCCGAAAATTGGTAAGAGGGAGTGTGAGGATGAAGATGAGAATGAAGTGATTACAAAGAAGCAGAAGATAGATGATGTTGTTGTAAAGGAAGAGAGTAAGGAAGAAATTGATTCAGATAATTCAAAAATTGGTAAGAGTGAGTGTGAGGATGAAGATCAGAAAGAAGTGATTACAGAGAAAGAGATTAAGAAGGAAATTGATTCAGATTATTCTGAACATGATAAGAATCTTGAAGCTAAAAACGAATCTGCCACTGGTTGCGGTCCTTCGGAGTCAATGGATGATGGTAGCTCAGACACTGATTCTCACAGAAGCTCTGGTGAGGATAACCCCGAAGATTTGGAGTGTCCAGGGTACAATGAGGAAGAAATAGAGGAAAAAGTCTCCGAAATACATCAGGAAAGACACGAAACCCCAGTCACTCCAAACGATAGATATGCTTCATCGAAGACAATACATGTTAGAAATTTGTCATACAGTGTGGAACGGGCTGATATGGAAGGTATTTTCAAAGATTGCGGTGAAGTTCTTGATGTTCGTTTCAACACAGATCGCGAAGGAAGATTTAGAGGATTTGGACATGTCGAGTTTGCAACGGCTGAAGCAGCACAAAAAGCCCTTGAATTGGATAATACAGAATTATTGCGTCGTCGCATTAGAGTTGGTATAGCTGTACAAAAGAGTGACTATCCCCCCTATAGAAGCAACTTGAGCAGCTCTTTCCAGAAGGGTGGAAATCTTCCGTCTCACACTGTAAAGGGTTTTGACACGCCCCTTGTAGAAAACAAGCCTAAAAGCCCAGCTACACCAAATGAAACAAATGTTGCATCAAAGACCATATATGTCAGAAACTTGTCATACACAGTGGAACGAGCTGATATGGAAAATGTTTTCAAAGATTGTGGAGAAATTGTTGATGTTCGTCTCCATACAGATCGCGAAGGGAACTTTAAAGGATACGGACATGTTCAGTTTGCAACAGCAGAAGCAGCACAAAAGGCTCTTGCGTTCAATAAGAAAGTGTTTTTCAATCGTCTTATGTTCGTTGGTATCGCTTTGGAAAGGGGTATATATTCCCCAAACAGAAGCAACTCGACCTGGAGCAGCTCATTCCATAAGGATGAAAGATTTCAGTCTCAAACTGTACCTGTGAATACATCCCTTGCCGAAGAGAAGTTGACTTGTGCAAAGGATGTTAAGGATATAGAGATGTCTGATGCTGCCTCTGCTGAGAATAAAGCTCCTGAAACCCCACCTACCCAAAAAGAGAAAAATGCTGCATCAAAAACAATATGTGTTAGAAACTTGTCATTCGATGTGCAACGGGCAGAAATTGAAAATATTTTCAAAGATTGCGGAGAAGTTGTTGATGTCCGTGTGCATGTGGATGTTGAGTTTGCAACCGCAGAAGCAGCAGAAAAGGCTCTTGAGTTGGATAACACAAAATTTGCGAACCGTCCCGTCAAAGTTGGTATAGCTCCAGGAGAGGGTGAATGTTTCCCCAATAGAAGCTTGAGCACCTCATTCCAGAAGGGCGAAAGTTTTCAGCCTCTAACCATATTTGTGATTGGATTTGATACATCCGTTGCAGAAGAGAAGATAAAAGCTAGCCTGAAAGCACATTTCAGTTCTTGCGGAGAGATTACAAGGATCTCGTTGCCAAGATATCATGATTCTGGTGCTATTAAGGGGTTCGCTCATTTGGACTTCAAGGATATTGATGGCTATAAGAAAGCACTACAACTTGATCAAACTGCAATTGGAGATCATTGGTTGTCAGTTGTAAAAGCAAAGCCTAGACGTGATTATCAGGGTATAGGTGGTGGCAGAGGTGGCTATCACGTTGGTGGATGGGATGGAGGAGACCATGGTGGGAGAGCAGGTTGGGGGAGAAGTCAGGGTGCTGGGAGGCACTGGACCGCCAATACTGAGCACTGGTGA 1989 0.4238 MSNESESEVCHNPIPPPKIGKRECEDEDENEVITKKQKIDDVVVKEESKEEIDSDNSKIGKSECEDEDQKEVITEKEIKKEIDSDYSEHDKNLEAKNESATGCGPSESMDDGSSDTDSHRSSGEDNPEDLECPGYNEEEIEEKVSEIHQERHETPVTPNDRYASSKTIHVRNLSYSVERADMEGIFKDCGEVLDVRFNTDREGRFRGFGHVEFATAEAAQKALELDNTELLRRRIRVGIAVQKSDYPPYRSNLSSSFQKGGNLPSHTVKGFDTPLVENKPKSPATPNETNVASKTIYVRNLSYTVERADMENVFKDCGEIVDVRLHTDREGNFKGYGHVQFATAEAAQKALAFNKKVFFNRLMFVGIALERGIYSPNRSNSTWSSSFHKDERFQSQTVPVNTSLAEEKLTCAKDVKDIEMSDAASAENKAPETPPTQKEKNAASKTICVRNLSFDVQRAEIENIFKDCGEVVDVRVHVDVEFATAEAAEKALELDNTKFANRPVKVGIAPGEGECFPNRSLSTSFQKGESFQPLTIFVIGFDTSVAEEKIKASLKAHFSSCGEITRISLPRYHDSGAIKGFAHLDFKDIDGYKKALQLDQTAIGDHWLSVVKAKPRRDYQGIGGGRGGYHVGGWDGGDHGGRAGWGRSQGAGRHWTANTEHW* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4736 662 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 534 615 IPR000504 GO:0003723
Mal1g4736 662 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 294 370 IPR000504 GO:0003723
Mal1g4736 662 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 533 648 - -
Mal1g4736 662 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 412 520 - -
Mal1g4736 662 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 95 383 - -
Mal1g4736 662 SUPERFAMILY RNA-binding domain, RBD 435 524 IPR035979 GO:0003676
Mal1g4736 662 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 445 511 IPR000504 GO:0003723
Mal1g4736 662 Gene3D - 267 380 IPR012677 -
Mal1g4736 662 Gene3D - 386 514 IPR012677 -
Mal1g4736 662 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 533 648 - -
Mal1g4736 662 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 412 520 - -
Mal1g4736 662 PANTHER NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED 95 383 - -
Mal1g4736 662 MobiDBLite consensus disorder prediction 1 134 - -
Mal1g4736 662 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 166 242 IPR000504 GO:0003723
Mal1g4736 662 SMART rrm1_1 446 507 IPR000504 GO:0003723
Mal1g4736 662 SMART rrm1_1 535 611 IPR000504 GO:0003723
Mal1g4736 662 SMART rrm1_1 167 238 IPR000504 GO:0003723
Mal1g4736 662 SMART rrm1_1 295 366 IPR000504 GO:0003723
Mal1g4736 662 SUPERFAMILY RNA-binding domain, RBD 282 381 IPR035979 GO:0003676
Mal1g4736 662 SUPERFAMILY RNA-binding domain, RBD 529 643 IPR035979 GO:0003676
Mal1g4736 662 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 296 361 IPR000504 GO:0003723
Mal1g4736 662 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 551 606 IPR000504 GO:0003723
Mal1g4736 662 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 169 236 IPR000504 GO:0003723
Mal1g4736 662 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 447 505 IPR000504 GO:0003723
Mal1g4736 662 MobiDBLite consensus disorder prediction 112 127 - -
Mal1g4736 662 SUPERFAMILY RNA-binding domain, RBD 156 259 IPR035979 GO:0003676
Mal1g4736 662 MobiDBLite consensus disorder prediction 640 662 - -
Mal1g4736 662 MobiDBLite consensus disorder prediction 422 442 - -
Mal1g4736 662 MobiDBLite consensus disorder prediction 18 96 - -
Mal1g4736 662 Gene3D - 135 265 IPR012677 -
Mal1g4736 662 Gene3D - 520 653 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4736 Mal-Chr1 113201798 113211021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4736 165 586 Eukaryotic Initiation Factors Gene Family AT2G36660 22.955 3.54e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4736 1 113201798 113211021 Mal1g4736 1 113201798 113211021 ECH