Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4553 ATGTCACTAAACAATAATGCTTTAATTTTCATTCTCCTTTGTTGTTTTTCTCTGATTCATAATGTTGTTTGTGTTGATTATGGAACAGCACTTACAAAAAGTTTGTTATTTTTTGAGGGACAACGTTCAGGTGTGTTGCCTAATAGCCAGAGAGTAACATGGAGAGGGAATTCTGCACTTAGTGATGGCCAAGATGTTGGGATTGACCTAGTTGGAGGATACTATGATGCTGGAGACAATTTGAAGTTAGGTTTTCCAATGGCATTTACCATAACCATGTTATCATGGAGCACAATAGAGTTCAATGACCAACTTGGAAAAAAGAATGAGCTTACAAATGCATTAGCAGCCATAAAATGGGGAACAAACTACTTGATGAAAGCACATCCACAACCAAATATTTTGTATGGAGAAATTGGTGATCCTGATTCAGATCATCAATGTTGGCAAAGACCAGAGGATATGTCAACACCTAGGAATTCTTATAGGATTGATGAACAACATCCTGGTTCTGATCTTGCTGCTGAAACTGCTGCTGCTTTGGCTGCTGCTTCCATTGCTTTTCAGTCTGTGGACAATAATTATGCCTCCACAATGCTAATGCATGCAACACAACTGTTTGATTTTGCAAACAATAATCAAGGCTTATACCATAATAGTATCCCACCGGCGGCAAAAATATATTCCAGCAGCGGATATAAGGATGAATTACTATGGGCAGCATCATGGCTTTATCGTGCTACAAAATTGAAAAAATACCTTGACTATCTTGGAGGAGCAGGAGACACTGGGGGTGCAAGAACAATGTTTAGTTGGGATGACAAGTATGTTGGTGCACAAATTCTTGTTGCAAAGCTTGTTTTAGATGGGACAGTGGAGTCTTCGGGTATTTGGGCCCAATACAAAGCAAATGCAGAACAATTCATATGTTCATGTGCACAAAAATCAACCCAAAACTTTCAGAAAACACCAGGAGGTTTGTTATGGTTTCAGCCATGGGGTAATAATCAATATGTTTCAACTGCTACATTTGCAATGTCCACTTATTCTCAATATTTGTCTACAAAACAAGCATCCCTTCAATGTAGTGGTGGTGTTGTCAGTCCTTCTGATCTCACATCTCTTGTTCAAGCTCAGGTGGACTACATATTAGGTTCAAATCCAAAAGGAATGAGTTACATGGTGGGATATGGATCAAATTATCCACAACAAATTCATCACAGAGGAGCATCAATTGTATCAATCAAATTGGATAGTTCATCAGTAGCATGCAAAGATGGTTTTGAGAAATGGTTCAATAGAAATGCACCAAATCCTAATATATTGGAAGGAGCAATTGTGAGTCCAGATCAAAATGATGATTTTACAGATAATAGGAATGACTACCAATTAGGAGAGCCAACTACTGTTTCTGTTGCACCTTTAGTTGGTGTTCTTGCTTATCTAGCTTAA 1452 0.3822 MSLNNNALIFILLCCFSLIHNVVCVDYGTALTKSLLFFEGQRSGVLPNSQRVTWRGNSALSDGQDVGIDLVGGYYDAGDNLKLGFPMAFTITMLSWSTIEFNDQLGKKNELTNALAAIKWGTNYLMKAHPQPNILYGEIGDPDSDHQCWQRPEDMSTPRNSYRIDEQHPGSDLAAETAAALAAASIAFQSVDNNYASTMLMHATQLFDFANNNQGLYHNSIPPAAKIYSSSGYKDELLWAASWLYRATKLKKYLDYLGGAGDTGGARTMFSWDDKYVGAQILVAKLVLDGTVESSGIWAQYKANAEQFICSCAQKSTQNFQKTPGGLLWFQPWGNNQYVSTATFAMSTYSQYLSTKQASLQCSGGVVSPSDLTSLVQAQVDYILGSNPKGMSYMVGYGSNYPQQIHHRGASIVSIKLDSSSVACKDGFEKWFNRNAPNPNILEGAIVSPDQNDDFTDNRNDYQLGEPTTVSVAPLVGVLAYLA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4553 483 Pfam Glycosyl hydrolase family 9 27 479 IPR001701 GO:0004553|GO:0005975
Mal1g4553 483 Gene3D - 23 483 IPR012341 GO:0005975
Mal1g4553 483 PANTHER ENDO-1,4-BETA-GLUCANASE 12 483 - -
Mal1g4553 483 PANTHER ENDOGLUCANASE 15 12 483 - -
Mal1g4553 483 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 382 408 IPR018221 -
Mal1g4553 483 SUPERFAMILY Six-hairpin glycosidases 21 482 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4553 Mal-Chr1 105808898 105815090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4553 9 482 Glycoside Hydrolase AT2G44550 60.842 0.0 584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4553 1 105808898 105815090 Mal1g4553 1 105808898 105815090 ECH