Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4551 ATGGAAAATTGGAAAGAGAATAACAGCAATGGGTATTTTGATGATCAATTATTGTGTGATTATGATCGAGAATCAGTTACGATGCCTTCTTCGATGTCTTCATCACCACCTAGACTTGGTTACATTGAACATCATGTATCTAAATTTGATACATTGGTTGGTATTGCAATCAAATACGGTGTTGAGGTTACAGACATCAAAAGGATGAATAGCCTTGTTACAGATCATCAGATATTTGCGCTTAAAACTGTTCAAATTCCATTACCTGGAAGACACCCTCCATCTCCTTGTTTATCAAATGGTTCCATTACTCCAGGAAATTGTAACTCTACACACAGTCCACCTGACAATGCACACCGTGAACTGCTTGAATCATTTCAGTCCATAAAAGTGAAGTCTTCTGACCGGAAGGTATCTCCAGCCATGAGCTCATTACAGGGTTATTATGGACTTCAAGTTGCTTCTAATCCATCAGAAAACGGTTCACCATCCAAGAACTCGTCTATGTCTGACCGTCCCTTGAGTCGTCACCGAAAATCCAAAAGTTTGGTCAATGTTATTTTGGAAGAGATTATGGAAAAGGATGATACTGCAGCAGGTGCAGAAACCTGGGAACTTAGTTCTGTTAAATGGAACGACAAACTTGTCCAGAGGCGTCAGAAATCTGTAGCCGACTTTACCAGAATACCAGAGTTGATTCTGAGGGAGGATAATAGCAACAGTGGTGGTCTTCCTTCAAGAATAGGAAAGGGTTTAGCTTTGAGACAGAAAGCAGCTAGCCGAACTGCATTGACAAATGATTCTGAATCAAGTGGTTTGAATCCTGTGCCAACGAGTATGGGGGATGATTTTCAAACCGATTGCTCGTCTGGTGTGAAGAAATCATCCAGTACATCTTGTTTGCAAGATCAGGATAATTGTGGCTCATCCATTTGGCCATCGAAAATGTGGAATTTGAAACCAGATTTACAGGCCCTTTCAACTGCAGCCATTGGAAAACCAATCTTTGATGGCTTGCCTAAGCCACTAACTGGTCGAAAGAATAAAGCTGCACTTGATTAA 1062 0.4087 MENWKENNSNGYFDDQLLCDYDRESVTMPSSMSSSPPRLGYIEHHVSKFDTLVGIAIKYGVEVTDIKRMNSLVTDHQIFALKTVQIPLPGRHPPSPCLSNGSITPGNCNSTHSPPDNAHRELLESFQSIKVKSSDRKVSPAMSSLQGYYGLQVASNPSENGSPSKNSSMSDRPLSRHRKSKSLVNVILEEIMEKDDTAAGAETWELSSVKWNDKLVQRRQKSVADFTRIPELILREDNSNSGGLPSRIGKGLALRQKAASRTALTNDSESSGLNPVPTSMGDDFQTDCSSGVKKSSSTSCLQDQDNCGSSIWPSKMWNLKPDLQALSTAAIGKPIFDGLPKPLTGRKNKAALD* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4551 353 MobiDBLite consensus disorder prediction 97 116 - -
Mal1g4551 353 MobiDBLite consensus disorder prediction 90 118 - -
Mal1g4551 353 SMART LysM_2 43 87 IPR018392 -
Mal1g4551 353 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 28 353 - -
Mal1g4551 353 MobiDBLite consensus disorder prediction 152 178 - -
Mal1g4551 353 SUPERFAMILY LysM domain 42 87 IPR036779 -
Mal1g4551 353 Gene3D LysM domain 29 93 IPR036779 -
Mal1g4551 353 CDD LysM 50 86 IPR018392 -
Mal1g4551 353 Pfam LysM domain 44 87 IPR018392 -
Mal1g4551 353 ProSiteProfiles LysM domain profile. 42 86 IPR018392 -
Mal1g4551 353 PANTHER LOC443603 PROTEIN-RELATED 28 353 IPR045030 -
Mal1g4551 353 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4551 Mal-Chr1 105643467 105646431 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g4551 1 105643467 105646431 Mal1g4551 1 105643467 105646431 ECH