Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3394 ATGGAGAGTGAGTGGAAAGCTAATGAGATATCACCAAATTGTCCAAGGTGTGGTTCTTCTAACACAAAATTTTGCTACTACAATAACTACAGCTTAACTCAACCAAGGTATTTTTGCAAAGGATGCAGAAGGTATTGGACAAAAGGTGGATCCCTCAGAAATGTTCCTGTTGGTGGTGGATGCAGAAAAAACAGAAGAGGTAACAACAAAGCCTTGTTAAGACAATCCTTTGATTCTCTCACTTTCAAAAATTCACCAAATTCTCACACTAACAATAGCTCAATTGGTCATTCTTATGATCCTATTTTGAGGAGTAATAATATTTCATCTTCTACCTCCTCATCATTGGTGAATGATGGACCCAATATTGATCTTGCATTAGTTTATGCAAATTTCCTCAATCAAAAGCCTGAGAATTCTAATCAAATGCAAAGAAAATTTGATCCTTCTCTAGAAAATTCTAGGCTATCAAATGTTGAAGTTGGTTCAAGTAGTTTAAATTTGTCTGAATTAGAACTTGGTTTCAAAGGGTGTTTGAATCTTAATCCAGAACAATTACCATCCACAATAGTAACACATTTTAGTGAGTTCAATTCTATGCAAACCCTTCAAAAAGATAGAATTGATCATTGTAGTAATATTATTCATGATGATGCTGTGAATGTGAATTTTGAGCTACCACCTTTACCAGGTGAAGTGGATTCATCCTCACATGATCATGTGTTGTGGTCCAATTCTGAAATGATGATAAACCTTCCATTTCAAGTCACTCAACCTCCACCACCACTTCTTGGTCCTGATCAAATTCATGATGCTGATTTGTTAATTGGTAATTGGAGCCCTTTTGATTTTCCGAGGGATGCTTAA 867 0.3564 MESEWKANEISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNKALLRQSFDSLTFKNSPNSHTNNSSIGHSYDPILRSNNISSSTSSSLVNDGPNIDLALVYANFLNQKPENSNQMQRKFDPSLENSRLSNVEVGSSSLNLSELELGFKGCLNLNPEQLPSTIVTHFSEFNSMQTLQKDRIDHCSNIIHDDAVNVNFELPPLPGEVDSSSHDHVLWSNSEMMINLPFQVTQPPPPLLGPDQIHDADLLIGNWSPFDFPRDA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3394 288 ProSiteProfiles Zinc finger Dof-type profile. 12 66 IPR003851 GO:0003677|GO:0006355
Mal1g3394 288 ProSitePatterns Zinc finger Dof-type signature. 14 50 IPR003851 GO:0003677|GO:0006355
Mal1g3394 288 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 1 287 - -
Mal1g3394 288 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 287 IPR045174 GO:0003700|GO:0006355
Mal1g3394 288 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3394 Mal-Chr1 57258530 57259396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3394 5 288 C2C2-Dof Transcription Factor Family AT3G52440 38.514 7.84e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal1g3394 zf-Dof 4.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3394 - - gmx:100787193 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3394 1 57258530 57259396 Mal1g3394 1 57258530 57259396 ECH