Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2777 ATGGCTTCGGACACAGCTTCTCGTTCGAGTTCCGCGGCCGATTCCTACATTGGTTGCTTGATCAGTTTGACATCAAAAAGTGAGATCAGATACGAAGGTGTTCTCTACAACATCAACACCGATGAATCCAGTATTGGTCTCAAAAACGTGCGCTCTTTCGGAACTGAAGGAAGGAAAAAGGAAGGTCCACAAATCCAGCCAGGTGACAGAGTCTATGAGTACATACTGTTCCGTGGGACGGACATCAAGGATTTACAGGTGAAATCTTCTCCACCTGTTCAGCCTACTGTACCAACAAATACCGATCCAGCTATTATTCAGTCTCAGTATCCTCGCTTGGTCACAACATCTACAAGTTTACCAGCTGTAAGTGGATCGTTGAATGATGCTAGTCCTAATACAACACAGCTAGGACATCCAGGGTCAAACTTTCAAGCGCCCTTGTATCAACCTGGAGGAAATGTAGTGTCATGGGGAGCTTCTTCGCCTGCTCCAAATGCAAATGGTGGTGGGCTTGCTATGCCTGTGTATTGGCAAGGATATTATGGTGCCCCAAATGGGCTTCCTCAGTTACATCAGCAATCTTTGTTTCGACCTCCGCCTGGCTTATCCATGCCTTCATCTATGCAGCAGCCGCTGCCATCATCTATGCAGCAGCCGATGCCATCTTCTCTGCAGCAGCCGATGCCATCTTCTATGCAGCAGCCGATGCCTTCATCTCTGCAGCAGCCGATGCCTTCATCTCTGCAGCAGCCAATGCATTCATCTATGCAGCAGCCATTGCAGTTTCCCAGTTTTAGTTCCTCTTTACCAACTGGACCTTCAAATTTTCCAGAATTCCCATCAGCTTTCCTCCCTGTGGGTACTGGTTCCCCTAATATAACATCTACTTCTGCACCTCCGTTGAATCTTTCAACAACTATTTTACCTCCAGCACCTTCGGCTACACTAGCTCCTGAAACTTTTCAAGTATCAGTTTCAAACAAGGCACCATCTGTGTCACTTCCTGCAGTTACACTAGGTGCTAACTTGCCATCGCTAGCTCCTTATACCAGTGGTGGTTCTGATATAAATGCTGCAGTACCATTGGCCAATAAACCCAATGCAGCTTCAGGTTCAAGTTTGTCATACCAAACTGTACCCCAGCAGATGACTCCTTCCATTGTTGGCACTTCAAATTCTGTCCGCACAGAACCACCAGTCCCTTCTCTGGTAACCCCAGCTCAATTATTGCAGTCTGGACAAACTGTAGTAGCTTCCTCCAAGCCTTCACAAACAGCACATAAAGATGTTGAAGTGGTTCAGGTATCATCAACATCGCCTCCTGAGCCATCTGTGCCTGTCGCTGCTGAAGCTCAGCCACCAATACTTCCATTGCCAGCTACTTCAAGGCCAATTCACAGGCCTGGTGGAGCTTCTAGCCAAACTCATCATGGCTATGGTTATAGGGGGCGTGGAAGAGGCAGAGGAATTGGGCAGGGTTTCCGCCCAGCTGAAAGGTTCACTGAGGACTTTGACTTCACGGCAATGAATGAGAAGTTCAAAAAGGATGAAGTATGGGGTCACCTAGGTAAAAGCAACAAGAAAGACGGGGAAGAAAATGCCAGTGATGAAGATGGTGATCATGATGAAGACAATGGTGATGTATCAAGCTTGGAGGTTAAGCCTGTTTATAACAAGGATGATTTCTTTGACTCACTCTCCTGCAACTCGCTCAATCATGATCCACAAAATGGAAGGGTTAGATATTCAGAACAAATCAAGATGGATACTGAGACTTTTGGTGATTTTACAAGGCATCGTGGTGGCTGGGGTGGCCGTGGTCCGTGGCGCGGTGGTGGTGGTGGACGTGCTCGAGGTGGTGGTTATTATGGAAGAGGGTATGGTGGCTATGGCGGAAGAGGAAGAGGTGGTGGGCGTGGCATGCCTGGTGGCCGTTATTAG 1944 0.4784 MASDTASRSSSAADSYIGCLISLTSKSEIRYEGVLYNINTDESSIGLKNVRSFGTEGRKKEGPQIQPGDRVYEYILFRGTDIKDLQVKSSPPVQPTVPTNTDPAIIQSQYPRLVTTSTSLPAVSGSLNDASPNTTQLGHPGSNFQAPLYQPGGNVVSWGASSPAPNANGGGLAMPVYWQGYYGAPNGLPQLHQQSLFRPPPGLSMPSSMQQPLPSSMQQPMPSSLQQPMPSSMQQPMPSSLQQPMPSSLQQPMHSSMQQPLQFPSFSSSLPTGPSNFPEFPSAFLPVGTGSPNITSTSAPPLNLSTTILPPAPSATLAPETFQVSVSNKAPSVSLPAVTLGANLPSLAPYTSGGSDINAAVPLANKPNAASGSSLSYQTVPQQMTPSIVGTSNSVRTEPPVPSLVTPAQLLQSGQTVVASSKPSQTAHKDVEVVQVSSTSPPEPSVPVAAEAQPPILPLPATSRPIHRPGGASSQTHHGYGYRGRGRGRGIGQGFRPAERFTEDFDFTAMNEKFKKDEVWGHLGKSNKKDGEENASDEDGDHDEDNGDVSSLEVKPVYNKDDFFDSLSCNSLNHDPQNGRVRYSEQIKMDTETFGDFTRHRGGWGGRGPWRGGGGGRARGGGYYGRGYGGYGGRGRGGGRGMPGGRY* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2777 647 CDD LSm14_N 16 87 IPR025609 -
Mal1g2777 647 SMART LSM14_2 10 110 IPR025609 -
Mal1g2777 647 MobiDBLite consensus disorder prediction 192 254 - -
Mal1g2777 647 Pfam FDF domain 500 595 IPR019050 -
Mal1g2777 647 ProSiteProfiles TFG box profile. 578 598 IPR025768 -
Mal1g2777 647 Pfam Scd6-like Sm domain 16 89 IPR025609 -
Mal1g2777 647 SUPERFAMILY Sm-like ribonucleoproteins 15 92 IPR010920 -
Mal1g2777 647 MobiDBLite consensus disorder prediction 208 254 - -
Mal1g2777 647 MobiDBLite consensus disorder prediction 522 554 - -
Mal1g2777 647 ProSiteProfiles FFD box profile. 556 571 IPR025761 -
Mal1g2777 647 PANTHER PROTEIN DECAPPING 5-LIKE 230 637 - -
Mal1g2777 647 PANTHER PROTEIN DECAPPING 5-LIKE 5 223 - -
Mal1g2777 647 PANTHER SCD6 PROTEIN-RELATED 230 637 - -
Mal1g2777 647 PANTHER SCD6 PROTEIN-RELATED 5 223 - -
Mal1g2777 647 Gene3D - 6 92 - -
Mal1g2777 647 ProSiteProfiles DFDF domain profile. 493 529 IPR025762 -
Mal1g2777 647 MobiDBLite consensus disorder prediction 464 493 - -
Mal1g2777 647 SMART FDF_2 499 598 IPR019050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2777 Mal-Chr1 39291608 39297122 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2777 1 39291608 39297122 Mal1g2777 1 39291608 39297122 ECH