Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2770 ATGATACAAGAAGATCAAGGACAGTGTTCTTCTCAAACAATCAATAACTTTGAAACTTATCAACAAGAGCAGTTTTTCCTTCAACAACAAATCATGAGGCAACAAAACAGTGATCATCATCATATCTTTGGTGGTGGAGGAAGGTCTATGTTCCCTACATCAAGTGATCATCAAGTTTCACCAATCTTGCAACAAACATGGTCTATGCAACAACTTCATCATCATCCTTTCAACCCTCATGACCCTTTTGTTATTCCTCAACAACAATCTTCACCTTATGCAAGTTTGTTTAACAGAAGAGTTCCTTCTCTTCAATTTGCATATGATCATCATGCAGGTTCTGAGCATCTTAGGATCATATCAGATACACTTCAACATGGATCAAGTTCAGGTCCCTTTGGTGGTTTTCAAGGTGAAGTTGGAAAGATGAGTGCTCAAGAAATTATGGAAGCTAAGGCTCTTGCTGCTTCTAAGAGTCATAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTTGCTAAGCTACGCAGCTTGTTGCCAAGCACAACCAAAACAGATAAAGCATCATTGCTAGCAGAAGTGATACAACATGTGAAAGAATTGAAGCGTCAAACATCATTGATAGCAGAAACAAGTCAAGTTCCAACTGAATGTGATGAATTAACAGTAGATGCTGCTGCTGATGATGATGAAGATTATGGATCAAATGGAAATAATAAGTTTATAATAAAAGCTTCACTTTGCTGTGATGATAGGTCAGATCTTTTGCCTGAACTAATCAAGACATTGAAAGCATTAAGGTTAAGAACACTTAAAGCTGATATAACAACACTTGGTGGACGTGTTAAGAATGTTTTGTTCATCACTGGTGAAGAAGATGATCATGAATATTGCATTAGTTCAATACAAGAAGCACTCAAAGCTGTGATGGAGAAGAGTGTTGGAGATGATTCTGCTTCTGGAAATGTCAAGAGACAAAGGACTAATATAATATCAATATCTAATTAG 1017 0.3707 MIQEDQGQCSSQTINNFETYQQEQFFLQQQIMRQQNSDHHHIFGGGGRSMFPTSSDHQVSPILQQTWSMQQLHHHPFNPHDPFVIPQQQSSPYASLFNRRVPSLQFAYDHHAGSEHLRIISDTLQHGSSSGPFGGFQGEVGKMSAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSQVPTECDELTVDAAADDDEDYGSNGNNKFIIKASLCCDDRSDLLPELIKTLKALRLRTLKADITTLGGRVKNVLFITGEEDDHEYCISSIQEALKAVMEKSVGDDSASGNVKRQRTNIISISN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2770 338 PANTHER TRANSCRIPTION FACTOR BHLH30 71 336 - -
Mal1g2770 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 212 IPR036638 GO:0046983
Mal1g2770 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Mal1g2770 338 SMART finulus 161 210 IPR011598 GO:0046983
Mal1g2770 338 CDD bHLH_AtAIG1_like 150 226 - -
Mal1g2770 338 PANTHER TRANSCRIPTION FACTOR BHLH30 71 336 IPR045847 GO:0003700|GO:0006355
Mal1g2770 338 Pfam Helix-loop-helix DNA-binding domain 158 204 IPR011598 GO:0046983
Mal1g2770 338 Gene3D - 150 211 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2770 Mal-Chr1 39208732 39210960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2770 10 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 54.494 1.91e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g2770 HLH 1.6e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2770 1 39208732 39210960 Mal1g2770 1 39208732 39210960 ECH