Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2758 ATGGAATTAGGAGGAAGTTGCACAGATGAAACTATCACAAGCAATGACTCTCTTTCGGCGAACCTATCTCCACCGCCGCCGAGCAATCTCAGCCGCGTTGGAAGCGGTGCTAGCGCCGTCGTGGATCCGGAAATTTTCGGCGGCTCCGGCGAAGCTGAATCTCGTAAACTTCCGTCTTCGAAATACAAAGGCGTGGTGCCACAGCCGAATGGACGTTGGGGAGCTCAGATTTACGAGAAACACCAGCGCGTGTGGCTTGGTACGTTCAACGAAGAAGATGAAGCCGCCAGAGCGTACGATATCGCCGCTTTGAGATTCCGTGGAAAAGATGCTGTTACGAATTCTAAAAGCCTCGCCGGTGTTGGTAACGACGCCGACGAAGGTGAAACTGAGTTTCTGAATTCACATTCCAAATCGGAGATTGTTGATATGCTTCGGAAACACACCTACGACGATGAGCTTAAGCAGAGCATGCGTGACATGTGCGGCGGGAGACAGCGGCGGAATGGAGAATCATCTGGTGCGGTGTCACGTGGCGCGTGTGATATGAAGGCGCGTGAGCATTTGTTTGAGAAAACCGTTACGCCGAGTGACGTAGGGAAGTTGAATCGGTTGGTGATACCGAAACAGCACGCGGAGAAGCATTTTCCGTTAAATGCGGTTGCTGTCGCCGTCGCAGGCGACGGAAACTCGCCGTCTGTTACGGCGGCGAAGGGTTTGCTTTTGAATTTCGAAGATGTTGGAGGGAAAGTATGGCGGTTTCGTTACTCGTATTGGAATAGTAGCCAGAGTTATGTTTTAACCAAAGGATGGAGCCGGTTCGTTAAGGAGAAGAATCTCCGAGCCGGTGATGCGGTTCGGTTTTTTAGGTCGACTGGACCGGACCGGCAGCTCTACATTGACTGTAAAGCAAGGAGTGTTGCTGTTGTCGGTAGCATTGGTGAGGTTGATAATAATGTTGGTGGTAATTTGTTTATTCCGGTCCAACCGGTAGTCGAACCGGTTCAGATGGTTCGGCTTTTTGGGGTGAATCTTTTGAAACTACCTGGTTCTGATGGTGTTGGTGGTAGTTGCAATGGGAAGAGGAAAGAGATGGAATTGTTTGCCTTAGAATGCAGCAAAAAGCCAAAGATAATTGGAGCCTTATAA 1149 0.5004 MELGGSCTDETITSNDSLSANLSPPPPSNLSRVGSGASAVVDPEIFGGSGEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDIAALRFRGKDAVTNSKSLAGVGNDADEGETEFLNSHSKSEIVDMLRKHTYDDELKQSMRDMCGGRQRRNGESSGAVSRGACDMKAREHLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLNAVAVAVAGDGNSPSVTAAKGLLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVRFFRSTGPDRQLYIDCKARSVAVVGSIGEVDNNVGGNLFIPVQPVVEPVQMVRLFGVNLLKLPGSDGVGGSCNGKRKEMELFALECSKKPKIIGAL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2758 382 CDD B3_DNA 188 291 IPR003340 GO:0003677
Mal1g2758 382 ProSiteProfiles B3 DNA-binding domain profile. 190 306 IPR003340 GO:0003677
Mal1g2758 382 SMART rav1_2 61 122 IPR001471 GO:0003700|GO:0006355
Mal1g2758 382 SUPERFAMILY DNA-binding pseudobarrel domain 187 302 IPR015300 -
Mal1g2758 382 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 382 IPR044800 GO:0003700
Mal1g2758 382 ProSiteProfiles AP2/ERF domain profile. 61 116 IPR001471 GO:0003700|GO:0006355
Mal1g2758 382 PANTHER AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR 1 382 - -
Mal1g2758 382 MobiDBLite consensus disorder prediction 7 35 - -
Mal1g2758 382 SMART B3_2 190 305 IPR003340 GO:0003677
Mal1g2758 382 Pfam AP2 domain 60 108 IPR001471 GO:0003700|GO:0006355
Mal1g2758 382 Gene3D - 179 311 IPR015300 -
Mal1g2758 382 Pfam B3 DNA binding domain 190 296 IPR003340 GO:0003677
Mal1g2758 382 MobiDBLite consensus disorder prediction 1 63 - -
Mal1g2758 382 Gene3D AP2/ERF domain 60 116 IPR036955 GO:0003700|GO:0006355
Mal1g2758 382 CDD AP2 60 114 IPR001471 GO:0003700|GO:0006355
Mal1g2758 382 SUPERFAMILY DNA-binding domain 60 114 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2758 Mal-Chr1 38967194 38968342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2758 6 382 B3 DNA Binding Superfamily AT1G25560 58.838 3.91e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-RAV Mal1g2758 B3 2e-25 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2758 1 38967194 38968342 Mal1g2758 1 38967194 38968342 ECH