Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2757 ATGCAAACTCATCATCATCATCATCATCATCATCACAAGTACTACTCATTCTCTTGCTTAGAAGATGAAGAAGATTCCATCTTCCTCTCTCTTGCCCCTCCTGGCCACCAAATACCTCCCAAACTCTCATCCCCTCATCCCCTTCATCAAATACCTATTTCTTCTACTAATACTACCTCTCTTCATCATGACCATACTCCCTTCCACATTAATACTTCAGAACCACCTCATACTCCCATTATTCCTCAATATTGGATCCCTTCTCCTGCTCAAATCCTTATTGGTCCCACTCAGTTCTCTTGCACTGTCTGCAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGGAAAGGACCTGAGTCTCTAAAAGGGTCAAAACCAGCATCATCTTCATCAATGTTGAAACTACCCTGCTATTGTTGTTCTGAGGGTTGTAAAAACAATATAAACTATCCAAGGTCAAAACCACTGAAAGATTTCAGAACCCTTCAAACACACTACAAGAGAAAGCATGGAGGGAAATCATTTGAGTGCAGAAAGTGTAGGAAGACATTTGCTGTGAGAGGTGATTGGAGGACACATGAGAAGAATTGTGGGAAGCTTTGGTTCTGTATCTGTGGTTCTGATTTCAAACACAAAAGATCTCTTAAAGATCATGTTCGTGCTTTTGGTAATGGTCATGCTCCACATACATTGGAATCTTTGAGTTTTGAAGATTATAAAGCAAATGAAAATTTCAAGGAAGAAGAAGAAAGTGGAAGTGAAAATGAAGATAATAACAGTGAAGTTGTTTTTAGTTTGAATTAA 837 0.3907 MQTHHHHHHHHHKYYSFSCLEDEEDSIFLSLAPPGHQIPPKLSSPHPLHQIPISSTNTTSLHHDHTPFHINTSEPPHTPIIPQYWIPSPAQILIGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGSKPASSSSMLKLPCYCCSEGCKNNINYPRSKPLKDFRTLQTHYKRKHGGKSFECRKCRKTFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFEDYKANENFKEEEESGSENEDNNSEVVFSLN* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2757 278 SMART c2h2final6 149 181 IPR013087 -
Mal1g2757 278 SMART c2h2final6 99 121 IPR013087 -
Mal1g2757 278 SMART c2h2final6 186 206 IPR013087 -
Mal1g2757 278 Gene3D Classic Zinc Finger 98 121 - -
Mal1g2757 278 PANTHER ZINC FINGER PROTEIN WIP2 48 270 IPR043584 GO:0003700|GO:0010468
Mal1g2757 278 MobiDBLite consensus disorder prediction 255 278 - -
Mal1g2757 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 99 126 IPR013087 -
Mal1g2757 278 SUPERFAMILY beta-beta-alpha zinc fingers 77 120 IPR036236 -
Mal1g2757 278 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Mal1g2757 278 PANTHER ZINC FINGER PROTEIN WIP6 48 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2757 Mal-Chr1 38949772 38950974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2757 15 242 C2H2 Transcription Factor Family AT1G13290 67.769 5.57e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g2757 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2757 1 38949772 38950974 Mal1g2757 1 38949772 38950974 ECH