Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g2756 ATGCAGCGTTTCAAAATGGGGTTCTCTGATTACATCCAAGCATTAGAACAAGAACGTCGTAAGATTCAAGTCTTCCCTAAAGAACTTCCTCTTTCATTAGAACTCGTTACACAAGCTATTGAAGCTTGTAGACAGCAATTGTCTGGAACAACAAGTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGATGGACCTGTTTTGGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCTTCTTATTGTGAACAAGTGTTTGATGATGAAGATGATGACCAACATTCTTCTCCTCATCATAAGCAACAAAAAATTTCTTTGGATAATGATAATAATAAGAATTGTGATAAGAAGAAATCTGATTGGCTTAGATCTGTTCAGTTATGGAATTCAGATCCTTCATCTGAAGAGGATGTTACTAGGAAAGTAGCGCCTGTGTTAGAATTGAAGAGAAATGGAAGTGGTGGTGGTGCTTTTCATCCATTCCAAAAAGATGAAAGAGTTAACAACAAGACATGTGAATTGTTGAGTAAAGGACAACCCTCTTCTACCGGTGTAGCGGCTGTGAGTTCTAATGTGGCGACTGTCACCAGTGACAATGCCGGAAGCAACAAAAGAGATGAGAAAGAGGAAAAGAGAAAGCAACGACGTTGCTGGTCGCAGGAGTTGCACAAGCGATTCTTGCAGGCACTTCATCAGCTTGGAGGTGCAGATTCTGCAACTCCAAAGCAAATTAGAGAGCTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTGCAGAAATACCGTTTGCATACTAGAAGACCAAGTCCAACAAATAACGAAAGTGCCAATTCACAAACAGCAGCACCTTTTGTCCTTGTAGGAAACATTTTTGTCCAACAACAAGAATATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAAGTTGTGGCACCTTCTGGAATCTATGCACCAGTAGCCACACATCCTCCAGTTGCTACAATTAAGAAACCAGAGTTTAAGAAGTTTGAGCATTCAATCTCAGAAGAAAGGGGTAATAATAGTGAAGGTGCTGTTCATTCAAATTCACCTACCTCTTCATCCTCTACACATACTCCTACCAATACTTCCTCTGGCTATTGA 1161 0.3988 MQRFKMGFSDYIQALEQERRKIQVFPKELPLSLELVTQAIEACRQQLSGTTSEYNLNGQSECSEQTTSTDGPVLEEFIPIKKRASSYCEQVFDDEDDDQHSSPHHKQQKISLDNDNNKNCDKKKSDWLRSVQLWNSDPSSEEDVTRKVAPVLELKRNGSGGGAFHPFQKDERVNNKTCELLSKGQPSSTGVAAVSSNVATVTSDNAGSNKRDEKEEKRKQRRCWSQELHKRFLQALHQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPTNNESANSQTAAPFVLVGNIFVQQQEYGGVASSTTTGEMTKVVAPSGIYAPVATHPPVATIKKPEFKKFEHSISEERGNNSEGAVHSNSPTSSSSTHTPTNTSSGY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g2756 386 MobiDBLite consensus disorder prediction 94 121 - -
Mal1g2756 386 MobiDBLite consensus disorder prediction 207 222 - -
Mal1g2756 386 Gene3D - 218 276 - -
Mal1g2756 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 219 274 IPR006447 GO:0003677
Mal1g2756 386 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
Mal1g2756 386 MobiDBLite consensus disorder prediction 97 121 - -
Mal1g2756 386 MobiDBLite consensus disorder prediction 358 386 - -
Mal1g2756 386 MobiDBLite consensus disorder prediction 183 222 - -
Mal1g2756 386 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 381 - -
Mal1g2756 386 MobiDBLite consensus disorder prediction 343 357 - -
Mal1g2756 386 MobiDBLite consensus disorder prediction 343 386 - -
Mal1g2756 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 381 IPR044787 GO:0003700|GO:0006355
Mal1g2756 386 MobiDBLite consensus disorder prediction 183 206 - -
Mal1g2756 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 276 IPR017930 -
Mal1g2756 386 SUPERFAMILY Homeodomain-like 217 277 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g2756 Mal-Chr1 38936887 38938740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g2756 10 334 G2-like Transcription Factor Family AT1G68670 48.276 7.97e-78 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal1g2756 Myb_DNA-binding 1e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2756 1 38936887 38938740 Mal1g2756 1 38936887 38938740 ECH