Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1922 ATGGCACTCTCGCGTCTTCGTCACCCTCTCATCTCTCACTCCATTCGTATCCTCTCTTCCTCCACCAGATCCATTTCCAGAACTCCTAATTCAAGGATTTATTCCATCGGTGGTAATGGGAATCTAAGGCCTACATCATGGTCTGGGCTTACTGGAGTTAATGATAGACCTTTGAAGTCGAAGTGGATTGATGTCAAATTCTTCTCGTCTTCAGATTTTCCGCACGAAGTCCTTGGGATGCCAGCTTTATCTCCTACAATGACCCAAGGTAATATTGCAAAATGGAGGAAAAAAGAAGGGGATAAGATAGCAGTGGGTGATATACTATGTGAAATTGAAACTGACAAAGCTACACTTGAATTTGAAAGTCTTGAAGAAGGATTTCTGGCTAAGATATTGGTACCTGATGGTTCAAAGGATGTGCCAGTTGGACAACCGATTGCAATAACAGTTGAGGAGGAAAGCGACATTCAAAATGTTCCTGCTTCTGTGGGGGATGAGAGCAGGGTTGAAGAGAAGAAACCAGCGCATCAGGATCCTGCAGATGAGGAGAGAAAACCAGAATCAACCTCTACGATTGATACATCAAATCTTCCACCTCACATTGTTCTTGGAATGCCTGCTTTGTCCCCAACAATGAACCAAGGAAACATTGCTAAATGGAATAAAAAAGAAGGAGACAAGATTGAAGTGGGTGACATATTATGCGAGATAGAGACAGACAAAGCTACCCTTGAATTTGAAAGTCTGGAAGAGGGGTACCTGGCTAAGATAGTTGCACCAGAAGGTTCAAAAGAAGTGGCAGTCGGACAGCCTATTGCAATAACAGTTGAAGATGAAGGTGACATTGAAGCTGTTAAGAATTCTATTAGCAGCAGCTCAATAAACCAAAAGGAGAAGACCACCCAACATGGCACCAAAAGTGAGGTCAAAACACAAAAAAACAATACAGCACGAATCAGTCCAGCTGCAAAGTTGCTAATTATGGAATATGGATTGGACGCATCAACGTTGAATGCAACTGGTCCTCATGGCACCCTACTGAAAGGCGATGTTCTTTCTGCAATTAAATCAGGAAAACTGTCTCCAAAACCTGTTTCATCTAAAGAAAAGGCATCATCATCTCAAAGTCATCAAGTTGCGACTTCAAAAGAATCAAAGTCCGACTTAAAGCAGTCAGATGCTTACGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGATTATTGGAATCTAAACAAAATACGCCACACTTATATTTATCATCAGATGTTACACTGGATCCTCTTCTTTCCCTTAGAAAGGATCTTAAAGAGCAGTATGACGTCAAAGTTTCAGTGAATGACATTATTATCAAAGTTGTAGCAGCTGCTCTCAGAAGTGTACCAGAAGCGAACGCATACTGGAATGATGAGAAAGGGGAAGTCATCTTATGCGATTCTGTTGACATATCAATAGCAGTTGCCACCGAGAAGGGCTTGATGACTCCAATATTAAAAAATGCCGATCACAAGACAATATCTTCCATCTCCTCAGAGGTCAAGGAACTAGCTGCAAAGGCTCGTGAAGGCAAGTTGAAGCCGCAAGAGTTCCAAGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTATCCTGTGGATAAATTCTGTGCTATTATAAATCCCCCACAGGCTTGCATTCTTGCTGTAGGGAGAGGCAACAAAGTTGTTGAACCAGTAATTGGAGCTGATGGAATTGAGAAGCCATCAGTTGCCACTAAGTTGAACTTAACATTGTCTGCCGATCATCGCGTCTTTGATGGCAAAGTTGGAGGTGCATTTCTCTCTGCTCTGCAGTCAAACTTCAGTGATATAAGACGGCTTCTTCTATAA 1881 0.4195 MALSRLRHPLISHSIRILSSSTRSISRTPNSRIYSIGGNGNLRPTSWSGLTGVNDRPLKSKWIDVKFFSSSDFPHEVLGMPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSKDVPVGQPIAITVEEESDIQNVPASVGDESRVEEKKPAHQDPADEERKPESTSTIDTSNLPPHIVLGMPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEFESLEEGYLAKIVAPEGSKEVAVGQPIAITVEDEGDIEAVKNSISSSSINQKEKTTQHGTKSEVKTQKNNTARISPAAKLLIMEYGLDASTLNATGPHGTLLKGDVLSAIKSGKLSPKPVSSKEKASSSQSHQVATSKESKSDLKQSDAYEDFPNSQIRKVIAKRLLESKQNTPHLYLSSDVTLDPLLSLRKDLKEQYDVKVSVNDIIIKVVAAALRSVPEANAYWNDEKGEVILCDSVDISIAVATEKGLMTPILKNADHKTISSISSEVKELAAKAREGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPPQACILAVGRGNKVVEPVIGADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSALQSNFSDIRRLLL* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1922 626 SUPERFAMILY Single hybrid motif 201 291 IPR011053 -
Mal1g1922 626 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 204 617 IPR006257 GO:0004742|GO:0006090|GO:0045254
Mal1g1922 626 MobiDBLite consensus disorder prediction 152 200 - -
Mal1g1922 626 Pfam e3 binding domain 319 353 IPR004167 GO:0016746
Mal1g1922 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 IPR003016 -
Mal1g1922 626 CDD lipoyl_domain 80 149 - -
Mal1g1922 626 PANTHER PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL 197 621 - -
Mal1g1922 626 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 319 356 IPR004167 GO:0016746
Mal1g1922 626 MobiDBLite consensus disorder prediction 288 316 - -
Mal1g1922 626 MobiDBLite consensus disorder prediction 367 383 - -
Mal1g1922 626 MobiDBLite consensus disorder prediction 360 395 - -
Mal1g1922 626 Gene3D - 198 302 - -
Mal1g1922 626 Gene3D - 70 175 - -
Mal1g1922 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 197 621 IPR045257 GO:0006086|GO:0045254
Mal1g1922 626 SUPERFAMILY Single hybrid motif 78 165 IPR011053 -
Mal1g1922 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 201 277 IPR000089 -
Mal1g1922 626 SUPERFAMILY CoA-dependent acyltransferases 392 626 - -
Mal1g1922 626 CDD lipoyl_domain 206 275 - -
Mal1g1922 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Mal1g1922 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 72 189 IPR045257 GO:0006086|GO:0045254
Mal1g1922 626 Gene3D - 380 626 IPR023213 -
Mal1g1922 626 PANTHER PYRUVATE DEHYDROGENASE PROTEIN X COMPONENT, MITOCHONDRIAL 72 189 - -
Mal1g1922 626 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 312 358 IPR036625 GO:0016746
Mal1g1922 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Mal1g1922 626 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Mal1g1922 626 Pfam Biotin-requiring enzyme 204 275 IPR000089 -
Mal1g1922 626 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 625 IPR001078 GO:0016746
Mal1g1922 626 MobiDBLite consensus disorder prediction 166 190 - -
Mal1g1922 626 Gene3D - 319 360 IPR036625 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1922 Mal-Chr1 25213225 25224185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1922 195 626 Acyl Lipid Metabolism Gene Families AT3G13930 43.640 6.43e-113 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1922 1 25213225 25224185 Mal1g1922 1 25213225 25224185 ECH