Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1213 ATGGACACAACTCAATGGCCTCAGATTATTGTGAAGCAACTAATAGAAGGTAATAATATTGTAGCAACAAATACATATGAAAAACCTATGTTGGAGAGGAAGCCAAAACCACAAAAACAAGAAGCAATTAATTGTCCAAGGTGTAATTCAATTAACACAAAATTTTGTTACTACAATAACTATAGTTTGACACAACCAAGATATTTCTGCAAAACATGTAGAAGGTATTGGACTCAAGGTGGATCTATTAGAAACATTCCTGTTGGTGGTGGTACAAGGAAAAACAACAAACTTAGATCTTCTTCAAATTTTGTTTCAAATCCATCACCTTCAACAAAAAACCATAAGATCCATCTTGAACAAGGACAAGATCTAAACTTGGTTCAACAAAATAACAATACTTCTTCTACTTCAACTACTACAGCTTCAAATTCTCATCATTTTTCTTCATTGGAGCTTCTTAGTGGAGGGTTAACTTCAAGCTCTAGGGGTTTGCATTCTTTCATGCCTGTTCCAGTTGAAGGTTGTAGGTTTCCTATGCAAGATTTTAAGCAAGTGGAAATGAATTTCTGTTTAGATGGGATTGGTGGAAGTGGTTATGGAAATAATCTTGATCATGGTGTTCAAGAGACAATTAGTGAAGGGAGGGTTTTGTTTCCTTTTGAGGATTTAAAACAGGTTTCTAGTACTAATAAGGAGGAGGATCAACATGGATATTCAGCTGGTTTTTGGACTGGAATGTTAGGAGGAGGATCATGGTAA 762 0.353 MDTTQWPQIIVKQLIEGNNIVATNTYEKPMLERKPKPQKQEAINCPRCNSINTKFCYYNNYSLTQPRYFCKTCRRYWTQGGSIRNIPVGGGTRKNNKLRSSSNFVSNPSPSTKNHKIHLEQGQDLNLVQQNNNTSSTSTTTASNSHHFSSLELLSGGLTSSSRGLHSFMPVPVEGCRFPMQDFKQVEMNFCLDGIGGSGYGNNLDHGVQETISEGRVLFPFEDLKQVSSTNKEEDQHGYSAGFWTGMLGGGSW* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1213 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 25 249 - -
Mal1g1213 253 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Mal1g1213 253 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 249 IPR045174 GO:0003700|GO:0006355
Mal1g1213 253 MobiDBLite consensus disorder prediction 84 115 - -
Mal1g1213 253 MobiDBLite consensus disorder prediction 94 115 - -
Mal1g1213 253 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Mal1g1213 253 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1213 Mal-Chr1 15295726 15296760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1213 1 253 C2C2-Dof Transcription Factor Family AT4G24060 38.551 1.31e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal1g1213 zf-Dof 1.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1213 - - mtr:MTR_1g077600 372.474