Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0483 ATGGCTCTCTTTCAAAAACCACATCTCTCCCTTGTCCTTGTTCTTTCTCTTTCGTTTTTGTCTCTTGCTTTTGCACTAGACATGTCCATCATCGATTACGATGCAAAACTTGACGCTGCGAAGAACGAAAACCACATCATGAAGATGTATGAATCGTGGTTGGTGAAGCATGGTAAGGTTTATAATGCATTAGGTGAGAAAGAACGTAGATTTGAAATCTTTAAGGACAACCTGCGGTATATCGAAAACCATAACAGCGTTGAAAAACATACCTTCAAGTTGGGTCTTACAAAGTTTGCTGATCTTACCAATGAAGAGTATCGTTCCATGTTTTTGGGTACACGACCTCGGAAATCCAAAGGGTTGTTGTCTGGTTCCAAGAGTAATCGTTATGCTTTTCGTGATAACGATGAATTGCCGGAATCTGTTGATTGGAGGGAGAAAGGTGCTGTTAATCCCGTCAAAGATCAAGGCCAATGTGGGAGTTGTTGGGCATTCTCAACGATTGGAGCTGTGGAAGGGATCAATCAAATTGTAACTGGTGATCTGCTATCTCTGTCAGAACAAGAGTTGGTGGATTGTGATAAAGGTTATAACATGGGGTGCAATGGAGGTCTCATGGACTATGCTTTTGAATTTATAATGAAAAATGGAGGCATTGATACAGAAGAGGATTACCCTTATAATGCTCGCGACAATCAATGTGATACATACAGGAAAAATGCTCGGGTAGTCACTATTGATGGATATGAAGATGTTCCTAAAAATGATGAGAAATCCTTGAAGAAGGCAGTTGCACATCAACCTGTTAGCGTTGCCATTGAAGCTGGAGGCAGGGCATTTCAACTTTACCAATCGGGTGTTTTTACCGGCATTTGTGGAACAGACCTCGATCACGGTGTGGTGGCGGTTGGATATGGAACAGAGAACGGAACCGATTACTGGTTAGTGAGGAACTCATGGGGATCATCATGGGGTGAAAATGGTTACATTAAGTTGGAGAGAAATTTGGTAACACAAGAAACTGGCAAGTGTGGAATTGCAATGGAGGCATCATATCCTATCAAGAAGGGTCAGAACCCCCCAAATCCTGGTCCTTCTCCTCCATCACCTGTTCAGCCTTCAACCGTATGTGATCAATACTACTCTTGCTCAACTGGAACCACATGTTGTTGCCTTTTTGAGTATGGAAACATCTGCTTTGCTTGGGGATGCTGCCCTATTGAGTCTGCAACTTGTTGTGAAGACGGTTCCAGCTGTTGCCCTCCTGAGTACCCCGTCTGCGATGTTGAAGCCGAAACTTGCCGATTGAGTAAAAATAATCCATTTGGAGTGAAAGCTTTGAAACGGACACCTGCAACAAGTACTTGGAGTTGGACTCCACGAAAAACCGCAATGAAAGGCAACTAA 1410 0.4312 MALFQKPHLSLVLVLSLSFLSLAFALDMSIIDYDAKLDAAKNENHIMKMYESWLVKHGKVYNALGEKERRFEIFKDNLRYIENHNSVEKHTFKLGLTKFADLTNEEYRSMFLGTRPRKSKGLLSGSKSNRYAFRDNDELPESVDWREKGAVNPVKDQGQCGSCWAFSTIGAVEGINQIVTGDLLSLSEQELVDCDKGYNMGCNGGLMDYAFEFIMKNGGIDTEEDYPYNARDNQCDTYRKNARVVTIDGYEDVPKNDEKSLKKAVAHQPVSVAIEAGGRAFQLYQSGVFTGICGTDLDHGVVAVGYGTENGTDYWLVRNSWGSSWGENGYIKLERNLVTQETGKCGIAMEASYPIKKGQNPPNPGPSPPSPVQPSTVCDQYYSCSTGTTCCCLFEYGNICFAWGCCPIESATCCEDGSSCCPPEYPVCDVEAETCRLSKNNPFGVKALKRTPATSTWSWTPRKTAMKGN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0483 469 Gene3D Granulin 375 437 IPR037277 -
Mal1g0483 469 Pfam Granulin 389 435 IPR000118 -
Mal1g0483 469 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Mal1g0483 469 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Mal1g0483 469 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Mal1g0483 469 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Mal1g0483 469 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Mal1g0483 469 SMART GRAN_2 378 435 IPR000118 -
Mal1g0483 469 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Mal1g0483 469 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Mal1g0483 469 Pfam Cathepsin propeptide inhibitor domain (I29) 50 107 IPR013201 -
Mal1g0483 469 PANTHER CYSTEINE PROTEASE 34 385 - -
Mal1g0483 469 CDD Peptidase_C1A 140 354 IPR039417 -
Mal1g0483 469 SMART Inhibitor_I29_2 50 107 IPR013201 -
Mal1g0483 469 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Mal1g0483 469 Gene3D Cysteine proteinases 26 357 - -
Mal1g0483 469 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 34 385 - -
Mal1g0483 469 SUPERFAMILY Granulin repeat 376 409 - -
Mal1g0483 469 SUPERFAMILY Cysteine proteinases 44 355 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0483 Mal-Chr1 5588406 5591202 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0483 1 5588406 5591202 Mal1g0483 1 5588406 5591202 ECH
Mal1g5735 1 134204098 134208554 Mal1g0483 1 5588406 5591202 ECH
Mal2g1180 2 13820130 13826713 Mal1g0483 1 5588406 5591202 ECH