Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0472 ATGGTGGTTTTTGGCGGGAAAAAGGTTCATCAAATTGTCACCGGCTTCGGCGGAAGCGGCCTTGGCCAGCTCGCCGTCGCTGTCGCTGTCTCCTTCCTTGTTCGTATCTTCTCTGCACCCGGCCCCGCTCTCTTGCCGGACGACGACGATGATGTTCCAATCAACGGCGATGAAACTCCTCCACCCGCCGGAAAGGTCACGCCGGTCACAATCTGTTGGAATAATATTAATTGCTCACTTTCTGATAAATCCTCCAAGTCCGTGAGATTTTTGCTTAAAAATGTGAGTGGAGAAGCTAAGCCAGGAAGATTATTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACATTGCTCAATGTTCTTGCTGGTCAGCTCGCAGCGTCGCCTCGGCTTCATTTGAGTGGCCTTTTGGAGTTCAATGGAAAACCTAGTTCCAGAAACGCATATAAGTTTGCTTATGTGAGACAGGAGGATCTATTCTTCTCACAGCTTACTGTGAGGGAAACATTGTCTCTTGCTACAGAGCTACAGCTTCCCAACATATCTTCTGCCGAAGAGAGGGATGAATATGTCAACAATCTCCTTTTCAAAATAGGCTTGGTCAGCTGTGCTGATACTAATGTTGGTGATGCAAAAGTTCGTGGAATCAGTGGTGGAGAAAAGAAACGTTTATCCTTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCTTTCCAGGCTGAGAAGGTTATGGAAACTCTCCGACAACTTGCACTGGATGGTCATACTGTAATTTGCTCTATACATCAGCCTAGAGGTTCAGTGTACAGCAAATTTGACGACATTGTCTTGCTAACTGATGGTTCACTTGTTTATGCTGGTCCTGCTGGTGATGAACCATTGGTGTACTTCTCGAAATTCGGGTACCACTGCCCAGATCATGTTAATCCTGCAGAATTTTTGGCCGATCTTATATCCATAGACTACAGTTCTTCTGATAGTGTCTATTCCTCTCAAAAAAGGATCAATGGGCTTGTTGAGTCATTCTCACTAAGACAATCTACAATAATATATGCTACTCCAATTACTCTAGATGACCTCTCAAAAAGTAGAAAGAGAATCAGCAAAAGAACTGTAGCAAAAATGAAAGGGAGCTGGTGGAAGCAATTCTGGTTGCTTCTTAGACGGGCATGGATGCAGGCTTCCCGTGATGCACCTACCAACAAAGTTCGAGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGATAGAATGGGATTGCTTCAGGTTGCTGCAATAAACACCGCTATGGCTGCTCTCACAAAGACTGTAGGCGTGTTTCCAAAGGAACGGTCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCATTGGGCCCCTATCTGTTTTCAAAACTGTTGGCTGAGGCTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTATACCCAATGGCACGTCTCCATCCCACTTTGTCGAGATTTGGGAAATTCTGTGGAATCGTTACTGCAGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACAGTTTTTATAGTATTTGGTGGCTACTATGTCAACCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGGGCCTTTCAAGGAATTTGCATCAATGAATTTCGTGGTCTTCAATTTGATCATCAGAATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTCTTTCCTTTGGCAGAAGTACAATTAGGGATACGCTGGTAGCGCAAAATAGAATATTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCCAAATACCAGCAACTTGAAACAACCCCTCCTGACCACAGCAAACCACATTTAAAACTTGAGGAGTTAAATTCTGAACAAGTTGATCAGACACATGAAGCACCAGAGGTCAGCCAAGTTGGATCGGACGAGCCCCTTGAGTCACCTGAAGTAGACCCTGTTGGCTCTTTTATCCTAGAAGGTGCTCAGTAG 2172 0.4452 MVVFGGKKVHQIVTGFGGSGLGQLAVAVAVSFLVRIFSAPGPALLPDDDDDVPINGDETPPPAGKVTPVTICWNNINCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPSSRNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEYVNNLLFKIGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDGHTVICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLVYFSKFGYHCPDHVNPAEFLADLISIDYSSSDSVYSSQKRINGLVESFSLRQSTIIYATPITLDDLSKSRKRISKRTVAKMKGSWWKQFWLLLRRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERSIVDRERAKGSYSLGPYLFSKLLAEAPIGAAFPLMFGAVLYPMARLHPTLSRFGKFCGIVTAESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGICINEFRGLQFDHQNSFDIQTGEQALERLSFGRSTIRDTLVAQNRILLFWYCTTYLLLEKNKPKYQQLETTPPDHSKPHLKLEELNSEQVDQTHEAPEVSQVGSDEPLESPEVDPVGSFILEGAQ* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0472 723 CDD ABCG_EPDR 68 299 - -
Mal1g0472 723 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 672 - -
Mal1g0472 723 Pfam ABC transporter 92 244 IPR003439 GO:0005524
Mal1g0472 723 ProSitePatterns ABC transporters family signature. 217 231 IPR017871 GO:0005524
Mal1g0472 723 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 317 IPR003439 GO:0005524
Mal1g0472 723 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 672 - -
Mal1g0472 723 MobiDBLite consensus disorder prediction 665 723 - -
Mal1g0472 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 302 IPR027417 -
Mal1g0472 723 SMART AAA_5 101 294 IPR003593 -
Mal1g0472 723 MobiDBLite consensus disorder prediction 672 689 - -
Mal1g0472 723 Pfam ABC-2 type transporter 394 604 IPR013525 GO:0016020|GO:0140359
Mal1g0472 723 Gene3D - 67 304 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0472 Mal-Chr1 5441053 5449019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0472 91 299 Calmodulin-binding Proteins AT2G36910 27.982 1.31e-10 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0472 1 5441053 5449019 Mal1g0472 1 5441053 5449019 ECH