Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0425 ATGAAGGACCGCCCTTCGCTGTCCTCCCATGGCGCCATCTACGTTCCTCCTCACCACCGTCTCCGCTCCGTCATTACCTCCGCCGCCGCTAACTCCACCACTCCGGTCACCGCTAAACTCCGTGAAACTCACGCACCGTCACCTACTACTCTTCAAACCCCCTCATCCAACAATAATGCAAATTATTGCTTCGTTTCTGCTTACGACGACGTCGTTACCGAGGATTGGTCCCATCGTCAAGTTCACGTTCCTTCACTTCCGAGTGGTTACCTCAATGATAACATGAATGAGTGGAAAAGGAAATTAACGATGCTGTTGAATGATAAGAGTAAGCAAGAGTTGATTTCGAGGGAGAAAAAAGATAGGCGTGATTTTGACGACATAGCAGTTTTGGCAACTAGAATGGGGTTGTATAGCCATTTGTATTCGAAGGTTGTTGTTTTCAGTAAAGTGCCGCTTCCTAACTACAGATTTGATTTGGACGAAAGACGGCCACAGAGGGAGGTGAGCATGCCTCTCACCGTATTCAGGCGGGTTGGTGCGTATTTTGAGGAACACCTTAGCCAAAAGTCTAGGGTAAAGAAAAGCTTTTCAGATTCGTCTTTTGCAAGATCAAGCAGTGACGGCAGTCTTGGTACAGATGAAGGGCTTTTTGTGCAACCTGAGCCGCTAGCATCCAGTAAGGCTGTTGTGGATAAAATTGTCCGGCAGATAAGCTTACAAATGCGTGATCAGCAACAAGCTTGGCAGGAATCACCTGAAGGAAGAAAAATGCTAGAATTTCGTAGCAATCTCCCTGCTTATAAAGAGAAAGAAGCAATTTTGTCAGTCATATCAAAGAATCAGGTAGTCATCATTTCAGGTGAAACAGGTTGTGGCAAGACAACACAAATTCCACAATTTATTTTGGAGTCTGAGATAGAATCAGTTCATGGAGCTGCTTGTAATATTATATGCACGCAGCCAAGACGAATTTCAGCCATGTCTGTTTCGGAAAGGGTTGCTTTTGAGAGAGGGGAGAAATTGGGCGAATCTGTTGGATACAAAGTTCGACTGGAGGGAATGAAAGGGAGGGATACCCATCTTCTCTTTTGCACTACGGGCATCTTATTAAGAAGATTACTGGCTGATAGAAACCTCAAAGGTGTAACTCATGTTATTGTGGATGAAATTCATGAACGTGGGATGAATGAAGATTTTCTGCTTATTGTCGTTAAAGAACTCCTTCCCCATCGGCCCGAAATCAAACTGATTTTGATGAGTGCTACCCTAGATGCAGAGCTCTTCTCTTCGTACTTTAATCGGGCTCCAATAGTGAACATACTGGGCTTTACACACCCCGTTAGAACTCTTTTTTTGGAGAACATTCTTGAAATGACGGGCTATCGATTGACTCCTTCTAATCAAATTGATGATTATGGTCAAGAAAGGGCATGGAAAATGAACAAACAGACCCCAAGAAAGAGGAAAAGCCAAATCGCTTCTGCTGTAGAGGATGCAGTTAGATCTGCTGATTTCAAAGAGTACAGCCTTCAGACACAGGAGTCTTTGTCATGTTGGAATCCTGACTGTATTGGTTTTAGTCTCATAGAATATATCCTTTGCGATATTTGTGAGAATAAAAGGCCTGGTGCTGTTTTGGTTTTCATGACTGGGTGGGATGATATAAGCTCTCTGAAAGAGAAGCTCCAAACACATACGATCTTGGGAGATCCGAAGCGTGTTTTGTTGCTTACGTGTCATGGTTCAATGGCTAGTTCGGAGCAAAAGTTAATATTTGAAGAGCCTGAAGATGGAGTAAGAAAAATAGTGCTAGCAACAAATATTGCTGAAACGAGCATCACAATAGATGATGTTGTTTTTGTTCTGGACTGTGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACACCTTGTTTGCTTCCTACATGGATCTCTAAGGCTTCCGCTCATCAAAGACGAGGAAGAGCTGGTCGTGTTCAACCTGGAGAGTGTTACCATCTCTATCCTAGATGCGTATATAATTCTTTTGCAGAGTATCAATTGCCAGAAATTTTGAGAACACCATTGCAGTCTCTCTGTTTACAAATCAAAAGTCTAAGACTCGGAAGTATATCTGATTTCTTGTCTAGGGCTTTGCAGTCTCCTGAGATACTCGCGGTACAAAATGCAGTTGAATATTTGAAAATAATCGGGGCTTTGGATGAGAGTGAGAATCTGACTATTCTAGGAAGCTATTTGACAATGCTTCCTATGGAACCCAAACTTGGCAAGATGCTTATATTAGGTGCTATTTTCAATTGCTTGGATCCCATATTAACTGTTGTTGCTGGACTTAGCGTAAGAGATCCTTTTCTAACACCACTGGATAAAAAAGATCTTGCAGAGGCAGCAAAAGCTCAATTCTCGGGTGCATTCAGTGACCACCTAGCACTTGTACGTGCTTATGCGGGTTGGAAAGATGCTGAGATAGACCTGGGTGGATACGAATATTGCTGGAAAAACTTTCTCTCATTCCAATCCATGAAAGCTATTGATGCTCTTCGGAGGGAGTTCATAGGCCTGCTTACGGATATTGGATTAGTTGATAGCAACACAACCGGCTGTGACACATGGAGCTATGATGTGAATCTTATCCGGGCAGTTATTTGCTATGGTCTATATCCTGGAATTTGTTCTGTGGTGCATAATGAGAAGTCATTCGCTTTGAAAACAATGGAGGATGGTCAAGTGCTCTTATATTCGAACTCGGTTAATGCTCGGGAAACTAAAATTCCATATCCATGGTTAGTTTTTAATGAGAAGATAAAAGTGAACTCCGTTTTTCTCCGTGACTCAACAGCTGTCTCTGATTCAGTGGTGCTTTTGTTTGGTGGAAGCTTGTCAAAAGGAGATGCTGATAATCATTTAAAAATGTTAGGAGGATATCTGGAGTTTTTCATGGAACCCACTGTTGCTGACATGTATCAGAGTATAAGGAGAGAACTTGATGACTTCATTCAGTGCAAACTGCATTCTCCAAGAATGAGCATACACTCGTATCATAACCTCCTATCTGCGGTACGTTTTCTGATTTCCAACGACACATGTGAAGGCAGATTTGTATTTGGTCGCCAGGTTCTTAAACCATCAAAGATATCTGTGATGGCCCCACACCCAGCATCCTTGGTTCCAAGGACGGAGAGTGGACCTGGGGGTGATAATTCTAAAAGTCAGCTCCAAACTTTGCTTACAAGAGCAGGACATGCTGCTCCTGTATACAAGACTAAACAGTTGAAGAACAACCAGTTTCGGGCCACAGTTGAGTTCAACGGAGTGGAGATAATGGGCCAACCTTGTAGCAATAAGAAGAGTGCAGAGAAAGATGCTGCAGCTGAAGCGCTGCAATGGTTGATGGGCAAGCAAGCTGGCTGTGAGTATATCGATCATATGTCGATGTTTCTTAAAAAAAGTAAGAAGGATCACAATTAA 3477 0.4268 MKDRPSLSSHGAIYVPPHHRLRSVITSAAANSTTPVTAKLRETHAPSPTTLQTPSSNNNANYCFVSAYDDVVTEDWSHRQVHVPSLPSGYLNDNMNEWKRKLTMLLNDKSKQELISREKKDRRDFDDIAVLATRMGLYSHLYSKVVVFSKVPLPNYRFDLDERRPQREVSMPLTVFRRVGAYFEEHLSQKSRVKKSFSDSSFARSSSDGSLGTDEGLFVQPEPLASSKAVVDKIVRQISLQMRDQQQAWQESPEGRKMLEFRSNLPAYKEKEAILSVISKNQVVIISGETGCGKTTQIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVVKELLPHRPEIKLILMSATLDAELFSSYFNRAPIVNILGFTHPVRTLFLENILEMTGYRLTPSNQIDDYGQERAWKMNKQTPRKRKSQIASAVEDAVRSADFKEYSLQTQESLSCWNPDCIGFSLIEYILCDICENKRPGAVLVFMTGWDDISSLKEKLQTHTILGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKIVLATNIAETSITIDDVVFVLDCGKAKETSYDALNNTPCLLPTWISKASAHQRRGRAGRVQPGECYHLYPRCVYNSFAEYQLPEILRTPLQSLCLQIKSLRLGSISDFLSRALQSPEILAVQNAVEYLKIIGALDESENLTILGSYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKAQFSGAFSDHLALVRAYAGWKDAEIDLGGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLVDSNTTGCDTWSYDVNLIRAVICYGLYPGICSVVHNEKSFALKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLSKGDADNHLKMLGGYLEFFMEPTVADMYQSIRRELDDFIQCKLHSPRMSIHSYHNLLSAVRFLISNDTCEGRFVFGRQVLKPSKISVMAPHPASLVPRTESGPGGDNSKSQLQTLLTRAGHAAPVYKTKQLKNNQFRATVEFNGVEIMGQPCSNKKSAEKDAAAEALQWLMGKQAGCEYIDHMSMFLKKSKKDHN* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0425 1158 MobiDBLite consensus disorder prediction 1054 1073 - -
Mal1g0425 1158 Gene3D - 528 682 IPR027417 -
Mal1g0425 1158 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 275 442 IPR014001 -
Mal1g0425 1158 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 881 962 IPR011709 -
Mal1g0425 1158 Pfam DEAD/DEAH box helicase 273 425 IPR011545 GO:0003676|GO:0005524
Mal1g0425 1158 Pfam Double-stranded RNA binding motif 1071 1133 IPR014720 -
Mal1g0425 1158 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1070 1135 IPR014720 -
Mal1g0425 1158 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 50 1084 - -
Mal1g0425 1158 SMART helicmild6 557 663 IPR001650 -
Mal1g0425 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 823 IPR027417 -
Mal1g0425 1158 SMART ultradead3 263 456 IPR014001 -
Mal1g0425 1158 CDD DEXHc_RHA-like 281 441 - -
Mal1g0425 1158 CDD SF2_C_RHA 512 671 - -
Mal1g0425 1158 Gene3D - 705 808 - -
Mal1g0425 1158 SMART DRBM_3 1071 1134 IPR014720 -
Mal1g0425 1158 PANTHER ATP-DEPENDENT RNA HELICASE 50 1084 - -
Mal1g0425 1158 SMART ha2_5 725 815 IPR007502 GO:0004386
Mal1g0425 1158 Pfam Helicase associated domain (HA2) 726 799 IPR007502 GO:0004386
Mal1g0425 1158 SUPERFAMILY dsRNA-binding domain-like 1065 1133 - -
Mal1g0425 1158 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 529 703 IPR001650 -
Mal1g0425 1158 Gene3D - 224 443 IPR027417 -
Mal1g0425 1158 Gene3D - 1057 1138 - -
Mal1g0425 1158 Pfam Helicase conserved C-terminal domain 533 662 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0425 Mal-Chr1 4962468 4974667 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0425 1 4962468 4974667 Mal1g0425 1 4962468 4974667 ECH