Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0414 ATGGAGGCGCAACCTCAACCTCCGACGCCGTCAAACGCACCACCGTTATCCTCCGTCGCTCCTCCACCACCACACCTCAACTACCCCGATTCTGTCGATTCATCCCCTCGCTCCCGCAACACCGACTCATGGGACGAGCCTTTCCCTCCGGCGTCATCCAAACTCCGTCTGATGTGCAGTTACGGCGGCCACATCGTCCCTCGTCCAACCGACAAATCACTCTGTTACGTCGGCGGTGACACTCGCATCGTCGTCGTTGAACGCGCCACCTCACTCGCGGACTTATCCACGCGCCTCTCCAAAACCTTCCTTAACGGAAGACCTTTCACTTTCAAGTATCAACTCCCAAACGAAGACCTAGATTCGTTAATCTCCGTTTCAACCGATGAAGATTTTGAGAACATGATCGATGAATACGATCGAACGAATTCGGCGAATTCGTCTGTCAAACCCTCGCGAATTCGTCTTTTTCTGTTTCCATCGAAACCTGAATCTGTTCAGTCAATTCCACCGCAAATTCTCGATACTACTGCTAGATCCGGTGAATGGTTCTTTGATACGATAAACGGTGCCGTATCGCTTAATCGAGGGTTTTCTGATTCTGCTGCTTCTTCTGTGAATCATCTTTTAGGTCTTGATGATGATGTTGCTGGGAATAATCATATTGAACAAGGTTCCACTGGAGAAGCGACTGAAGGTGTTTCTCAACCTGGATCTTTTGCGAATTGTAAGAATTTGAAGCAGGATGTTCATTCTGTTCCTGATTCACCTATGATGGAGACTTCATCGTCTTTTGGTTCAACTTCTTCGTCGCCGTCTTTGGCGAATTTGCCTCCAATTAAGGTGCATGTGGAAGATGGTGGTTCTGGTGGAGTTAGGGTTCAACAGCAGCAACAATTGCAACAGCAGCAGCAGGATCAGAAGGTTTTGGGGATTGATGAACAGTTTGCTCAAATGGTTGTTGGTGTTGGTGGTATTGGACAGAGGCTACAGGATGAGGGTTTTGCTGTGATGTCTTCACCGCCTCATCCTCCGGTGCCGACTACGCTGGCGGCGGTTGGTGTTCCGATTGGTTCTGCTGTTGTTGGTGATTATCAGAATAGGGTTTTTTCTGATGATGAGAGATCGGATCATGGAGTAGCAGTTGGGTATAGAAAACCACCAACCCCTCAGCCACAGGCTGTTCAAGCTCAAACTCAAGCTCAAGCTCAAGCTCAAACTCAAACTCAAACTCAGGCACAATCTCAGGCACAGTCACAAGCACAAACACAGTCACAAGCTCCCCAATTTCAACAAAAGTCAAGTGGCGGCGGCTCCGATTTGCCTTCTCCTGATTCAGTTTCAAGCGATAGTAGTCTTTCAAATGCGATGTCGCGTCAAAAACCTGTTATCTATCAAGAGCAAGTTCAGATTCAACCTGGAACTACAAGGGTTCTAAGCAACCCTGTGGATCCAAAGCTCAATTTGTCTGATCCACATGGTAGGATCCAGGTGCAGCAACATGTACAGGACCCTGGATATTTGCTGCAACAGCAATTCGAACTCCAGCAGCAGCAACAGCAACAGCAATTCGAACTCCAGCAGCAGCAACAACAGCCTAAACATCAGCAACAACAGCCTCAACATCAGCAACAACAGCTTCAACATCAGCAGCAGCAACAGCAGCAGTTTATTCCTGGGGGACACTACCTTCATCATAACCCTGCAATTCCTACATACTATCCTGTATATCCTTCACAGCAACAGCCCCATCACCAGGTTTACTATGTACCTGCAAGACAGCCCCAACAAGGTTACAATATTTCTGTGCAGCAGGCTAATATGGGTGAATCTGCCACAACAATCCCTTCTAGCAGACCCCAAAACCCTCCAAACCCTACCACATTGGTTCATCAAAATGCAGCTTACAACCCCATTAGAAATGCTCCCCTACCCAAAACTGAAATGACGGCTGCTGCTTACAGAGCTGCAACTGGAGGCAGCCCTCAATTTGTGCAGGTTCCTACAAGTCAGCATCAGCAGCAGTATGTCACTTACTCCCAGATCCACCATCCGTCTCAATCCATGGCTCCTAATTCTGCTGCCCCTGCCAATTATGCTTATGAATATGCTGATCCTGCTCAAATATACTACTCTCAGCCTATGGCTCCCACAATGCCTTCACAGTACCAGACCATGGCAGCTGCTACTATGATGCAGACGGAAGTTCCTGCACAGCATCCGTCGGACGGCTTGAAGCAGCAGATAAGAACCTCACAGCCACTATAA 2268 0.4824 MEAQPQPPTPSNAPPLSSVAPPPPHLNYPDSVDSSPRSRNTDSWDEPFPPASSKLRLMCSYGGHIVPRPTDKSLCYVGGDTRIVVVERATSLADLSTRLSKTFLNGRPFTFKYQLPNEDLDSLISVSTDEDFENMIDEYDRTNSANSSVKPSRIRLFLFPSKPESVQSIPPQILDTTARSGEWFFDTINGAVSLNRGFSDSAASSVNHLLGLDDDVAGNNHIEQGSTGEATEGVSQPGSFANCKNLKQDVHSVPDSPMMETSSSFGSTSSSPSLANLPPIKVHVEDGGSGGVRVQQQQQLQQQQQDQKVLGIDEQFAQMVVGVGGIGQRLQDEGFAVMSSPPHPPVPTTLAAVGVPIGSAVVGDYQNRVFSDDERSDHGVAVGYRKPPTPQPQAVQAQTQAQAQAQTQTQTQAQSQAQSQAQTQSQAPQFQQKSSGGGSDLPSPDSVSSDSSLSNAMSRQKPVIYQEQVQIQPGTTRVLSNPVDPKLNLSDPHGRIQVQQHVQDPGYLLQQQFELQQQQQQQQFELQQQQQQPKHQQQQPQHQQQQLQHQQQQQQQFIPGGHYLHHNPAIPTYYPVYPSQQQPHHQVYYVPARQPQQGYNISVQQANMGESATTIPSSRPQNPPNPTTLVHQNAAYNPIRNAPLPKTEMTAAAYRAATGGSPQFVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAAPANYAYEYADPAQIYYSQPMAPTMPSQYQTMAAATMMQTEVPAQHPSDGLKQQIRTSQPL* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0414 755 SMART PB1_new 69 161 IPR000270 GO:0005515
Mal1g0414 755 MobiDBLite consensus disorder prediction 251 273 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 31 47 - -
Mal1g0414 755 CDD PB1_UP2 58 159 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 526 555 - -
Mal1g0414 755 Pfam PB1 domain 70 160 IPR000270 GO:0005515
Mal1g0414 755 ProSiteProfiles PB1 domain profile. 54 152 IPR000270 GO:0005515
Mal1g0414 755 MobiDBLite consensus disorder prediction 734 755 - -
Mal1g0414 755 SUPERFAMILY CAD & PB1 domains 71 169 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 255 273 - -
Mal1g0414 755 PANTHER EXPRESSED PROTEIN 15 745 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 1 49 - -
Mal1g0414 755 Gene3D - 74 159 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 373 491 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 391 483 - -
Mal1g0414 755 PANTHER OS05G0427100 PROTEIN-RELATED 15 745 - -
Mal1g0414 755 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0414 Mal-Chr1 4724638 4727205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0414 51 219 MAP Kinase Kinase Kinase AT1G79570 33.728 1.55e-24 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0414 1 4724638 4727205 Mal1g0414 1 4724638 4727205 ECH
Mal1g0414 1 4724638 4727205 Mal5g0381 5 5860048 5861872 ECH
Mal1g0414 1 4724638 4727205 Mal8g3798 8 110121960 110124528 ECH