Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0412 ATGCATAGTGAAGTGAAAAGGGTATTCATTGGAGCAGGATGCAACAGAATAGTTAACAACGTTTCTTGGGGTGCTTCTGGTTTTGTCTCTTTTGGAGCTTCCAACGCCGTCGCCATTTTCTCCCCTAAGAGTGCTCAAATTTTGACTACTCTTCCTGGTCACAAAGCTGTTGTGAATTGCACTCACTGGCTCCCAACCAGTAAATTTCTATTTAAAGCAAAAGAATTGGAGTTGCATTATTTGCTATCTGGAGATGCAGATGGTGCTATTATTCTATGGGAACTGTCCCTTGTTGATGGAAAGTGGAGGCAAGTGTCACAAGTACCACAATCCCACAAAAAAGGGGTTACATGCATTAATGGGATTATGGTTTCTCAAACTGAGGCGATGTTTGCATCTACTTCTTCAGATGGTACTGTTTGTATATGGGAACTTGTATTTCCACTGAAGAGTAGTGGTGACTGTAAATTATCATGCCTGGACTCTTTTTCCATTGGTTCTAAATCTATGGTAGCCTTGTCGATGGCGGAACTGCCTGGATGTAGTGGTCAAATCGTCCTTGCAATGGGAGGATTGGATAACAAGATTCACCTTTACTGTGGAGGAAGGACAGGAAAGTTTGTACATTCATGTGAGCTAAAAGGGCATACAGATTGGATCCGGAGTTTGGACTTCTCATTACCTATAAGCATCGATGGGGAGGTAAACGATATTCTTCTGGTAAGTTCGTCCCAAGATAAATGCATACGAATTTGGAAGATGGCATTACGTAGCTCTGTGCCAAACGGGAATGGCATATATAGGGAGGAAGAATCAAGCTTATCATCCTATATAGAAGGTCCGGTACTTGTGGCCAGCTCGTCTTCTTTTCAGATATCCTTAGAATCTCTTTTGATTGGACATGAGGATTGGGTATATTCGGTAGAATGGCAACCCCCTTTGGTTGTATCCACGGAAGGAGAAGCCTATTATCAACCACAAAGCATTTTATCTGCATCCATGGACAAGACTATGATGATCTGGCAGCCTGAAAAGACTTCTGGTGTGTGGATGAATGTGGTCACTGTTGGCGAACTAAGCCACTGTGCTCTGGGGTTCTATGGTGGTCATTGGAGCCCAAATGGAGATTCAATTTTAGCACATGGATATGGTGGATCGTTCCATCTTTGGAAAAATATTGGTGATGACAACTGGCTGACACAAAAGGTTCCCTCTGGTCATTTTGCATCAGTGACCGATATAGCATGGGCTAGATCCAGTGATTACATTATATCAGCTAGTCATGACCAGACAACTAGAATCTATGCTCCGTGGAAAGTTGAGGCTTCTCTCGAAGATGGAGAACGTTGGCATGAGATTGCCCGCCCTCAGGTTCATGGTCATGACATAAATTGTATGACAGTTGTTCATAGTAAGGGTAATCATCGATTTGTTGGTGGAGCTGATGAGAAAGTTGCTAGAGTGTTTGAAGCCCCATTATCATTTTTGAAAACGTTAAGTAATGCCACTTTGCAGAAGTCTTGTTATTCTGATGATGACTTGACAAATGTTCAGATTTTGGGTGCAAATATGTCAGCTCTTGGGCTATCACAAAAACCTATTTATGCTCAAGCTGTACATGAGACCCCTGATACAAATGGGGTTGATGGTCTCGACACCTTTGAAACTGTTCCCGACGCAGTTCCAACCGTGTTTACTGAACCTCCAATTGAAGATCAGCTGGCATGGCACACACTCTGGCCTGAATCACATAAACTCTACGGCCATGGAAACGAGTTATTTTCGTTATGCTGTGATCATAGGGGCGAGCTTGTTGCTTCTTCATGTAAGGCTCAATCTACAGCTGTGGCAGAAGTATGGCTTTGGCAGGTTGGTTCATGGAAAGCAGTTGGCCGGTTGCAATCCCATAGCTTAACAGTGACACAGATGGAATTCTCACACGACGACAACTTTCTTTTGACTGTCTCAAGGGATCGCCAGTTCTCAGTTTTTTCAATCACAAGAACAGGCACTGGTGAAATTAGTTATAGTCTTCTTGCGAGACAGGAGGGACACAAGCGGATTATCTGGTCATGTTCTTGGAACCCACACGGCCATGAATTTGCAACAGGTTCACGCGACAAGACAGTGAAAATATGGGGTGTAGAGAAGGAATCATCGTCAGTAAGGCAGCTTATGACTTTACCTCAATTTACGAGTAGTGTGACGGCTTTGTCTTGGGCTGGCCTCCCTAATAAAAAAAATGTCAGAGTTCTAGCTGTCGGTATGGAAAACGGCCAAATAGAATTGTGGCGTCTGTCCTATAACAGACAAGATAATGGAGGCATTGCCGTACCAGGTTTCGCCGCTGCTCTTCTTGTTCGTGTAGATCCTTTTATATGCCATGCCTCTACAGTCAACCGTCTGGCATGGAGAAAAAATGAAGAAGATCACAAAAGTCTACAACTTGCTTCTTGTGGAGCTGATAATTGTGTAAGAGTGTTTGATGTAACTGTTTGA 2499 0.4338 MHSEVKRVFIGAGCNRIVNNVSWGASGFVSFGASNAVAIFSPKSAQILTTLPGHKAVVNCTHWLPTSKFLFKAKELELHYLLSGDADGAIILWELSLVDGKWRQVSQVPQSHKKGVTCINGIMVSQTEAMFASTSSDGTVCIWELVFPLKSSGDCKLSCLDSFSIGSKSMVALSMAELPGCSGQIVLAMGGLDNKIHLYCGGRTGKFVHSCELKGHTDWIRSLDFSLPISIDGEVNDILLVSSSQDKCIRIWKMALRSSVPNGNGIYREEESSLSSYIEGPVLVASSSSFQISLESLLIGHEDWVYSVEWQPPLVVSTEGEAYYQPQSILSASMDKTMMIWQPEKTSGVWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNIGDDNWLTQKVPSGHFASVTDIAWARSSDYIISASHDQTTRIYAPWKVEASLEDGERWHEIARPQVHGHDINCMTVVHSKGNHRFVGGADEKVARVFEAPLSFLKTLSNATLQKSCYSDDDLTNVQILGANMSALGLSQKPIYAQAVHETPDTNGVDGLDTFETVPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHRGELVASSCKAQSTAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVSRDRQFSVFSITRTGTGEISYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWGVEKESSSVRQLMTLPQFTSSVTALSWAGLPNKKNVRVLAVGMENGQIELWRLSYNRQDNGGIAVPGFAAALLVRVDPFICHASTVNRLAWRKNEEDHKSLQLASCGADNCVRVFDVTV* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0412 832 SMART WD40_4 396 436 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 101 144 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 785 829 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 626 665 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 44 94 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 291 342 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 449 490 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 721 765 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 352 391 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 579 623 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 675 714 IPR001680 GO:0005515
Mal1g0412 832 SMART WD40_4 204 253 IPR001680 GO:0005515
Mal1g0412 832 PANTHER WD REPEAT-CONTAINING 3 831 - -
Mal1g0412 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 633 666 IPR001680 GO:0005515
Mal1g0412 832 PRINTS G protein beta WD-40 repeat signature 240 254 IPR020472 -
Mal1g0412 832 PRINTS G protein beta WD-40 repeat signature 701 715 IPR020472 -
Mal1g0412 832 PRINTS G protein beta WD-40 repeat signature 131 145 IPR020472 -
Mal1g0412 832 Pfam WD domain, G-beta repeat 401 435 IPR001680 GO:0005515
Mal1g0412 832 Pfam WD domain, G-beta repeat 209 253 IPR001680 GO:0005515
Mal1g0412 832 Pfam WD domain, G-beta repeat 683 713 IPR001680 GO:0005515
Mal1g0412 832 Pfam WD domain, G-beta repeat 106 143 IPR001680 GO:0005515
Mal1g0412 832 Pfam WD domain, G-beta repeat 46 93 IPR001680 GO:0005515
Mal1g0412 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 404 435 IPR001680 GO:0005515
Mal1g0412 832 SUPERFAMILY WD40 repeat-like 27 346 IPR036322 GO:0005515
Mal1g0412 832 Gene3D - 570 680 IPR015943 GO:0005515
Mal1g0412 832 ProSiteProfiles Trp-Asp (WD) repeats profile. 682 723 IPR001680 GO:0005515
Mal1g0412 832 Gene3D - 401 520 IPR015943 GO:0005515
Mal1g0412 832 Gene3D - 148 275 IPR015943 GO:0005515
Mal1g0412 832 Gene3D - 2 145 IPR015943 GO:0005515
Mal1g0412 832 Gene3D - 681 832 IPR015943 GO:0005515
Mal1g0412 832 PANTHER ELONGATOR COMPLEX PROTEIN 2 3 831 - -
Mal1g0412 832 SUPERFAMILY WD40 repeat-like 183 767 IPR036322 GO:0005515
Mal1g0412 832 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 682 716 - -
Mal1g0412 832 Gene3D - 280 400 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0412 Mal-Chr1 4709824 4715012 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0412 1 4709824 4715012 Mal1g0412 1 4709824 4715012 ECH