Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0390 ATGAACCAAAAACAACCCTTCTTCTTTCTATTCTCTTCTCCCCTAATTTATTCATACATCACCCTTTTTTATCTTCTTACCACAACCACTCTATGCTCTATAGATCCAAAATTTGAAGCTTGTGAACCCAAAACATGTGGCAACCAAAGTATAAGCTACCCTTTCTACATCAAAGGAATACAAGAACCTTATTGTGGCTACCCTGGGTTTGGCATCTCTTGTAACAATACTATTGGTTTTCCAATCCTTAATCTTTCCAATACCTTTTACACAATCAACAAGATTTTCTATCAAAACCATTCATTAAGAGTGTCCAACGTTGCGTTTTCAAGATCAAACAGCAACAAAGGTTGTCTTTCACCAACCCAAAACCTCACTTTTCCCATCAACATGTTTTATCTTGCACCTAACCAAAGTGAAGTGAGATTGTTCTTCGGATGCGACTCAACAAAGCTACCTAGCACTCTGCAAGGGAACAAAATTGGTTGCTATGCAGAAAATGAAACGAGTTCGGTTGTGGCATTGTATGCGGATGATAAAAATGTAAGCGTGGTGTCAAAGAGTTGCAGAGATGAGGTGGTTTATGCAAGGGTTGAAAATGGTGTGAAAGGAGGGATTGAAGAGTCACTGAGAAATGGGTTTAGGTTGAATTGGATAGCTAGTGATTGCAATCAATGTAACAGTACTGGAGGAAGGTGTGGCTTTGATAAAGATATATACAGTTTCAGGTGTTACTGTACTGATAGAGTTCATGCTGCAAAATGTGATCCAGTTACGGTTGCAAAGAAAAACGGGCTGACTCGGAATGCCAAACTGGGTATAGGTTTGGGTATTGGAATCCCAGTCATCTTGTTCATTGGGTCACTGCTTCTCCTTCTACTCTACAAACGAAAACATGCTATCTCGGTTGGACACTTCCAATCTAGTAACTCTTATTCTGATTCCTCCATAAATCCACGCCGAGAAATTGGTAGTAAATACTTCGGAGTTCCATTATTCTCCTACGACGAGCTTAGAAAAGCAACAAACAATTTCGACCATACTAAAGAACTTGGAGATGGAGGCTTTGGTACTGTCTACTTTGGGAAACTTCCAGATGGACGTGAAGTTGCTGTCAAGCGTTTATACGAACACAACTACAGGAGGGTAGAACAATTCATGAATGAAGTCAATATCCTCACAACTTTGCGGCACAAAAATCTTGTGTCCCTCTATGGCTGCACTTCACGGCACAGCCGTGAACTACTTCTTGTGTATGAATATATTTCAAATGGCACCATTGCATGTCATCTCCATGGCGAATTGGCCAAGCCCGACTTACTACCATGGTCTATACGAATTAAAATTGCCATAGAGACTGCTACTGCCTTGGCTTATCTCCATGCTTCTGGTATCATTCACCGTGACGTGAAAACCAGTAACATACTCCTTGACGACAATTTTCGTGTTAAAGTTGCAGATTTTGGCCTTTCAAGACTATTCCCTGAGGATGCCACTCATGTCTCCACAGCTCCACAAGGAACACCAGGTTACCTTGACCCTGAGTATCACCAATTTTATCAGCTTACTAGCAAGAGCGATGTATACAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCCGTTGATATAAACAGAAGTAGGGAAGAGATTAACTTGTCAAATCTAGCCACAAAGAAGATTCAAGAAAGTGCAATTGATGAGCTGGTGGATCCTTGTCTTGGTTTTCATTCAGACAATGAGGTTAATAGGATGATAGTTTCAGTGGCAGAATTGGCTTTTCAATGTTTGCAAAAGGACACGGAGTTGAGACCTTCTATGGAAGAAGTCTTGGATGAACTTAGGAGAATAGAGAGTGGGAAGGATGTGGTTGAGGTTGTAGAGGAGGTAGATGTTGATGGTGTTGGATCTTCACACAGTAATGTACATCCACCACCAGCCTCACCTGAATGGGATGAAGTTGGATTATTGAAGAGTGTGAAAATTATGAAGCATCCGTCTTCACCAAACACCGTCACTGATAAATGGGAAAGTATTAATACTACGCCTAATGCCAGTGCTTAA 2073 0.4096 MNQKQPFFFLFSSPLIYSYITLFYLLTTTTLCSIDPKFEACEPKTCGNQSISYPFYIKGIQEPYCGYPGFGISCNNTIGFPILNLSNTFYTINKIFYQNHSLRVSNVAFSRSNSNKGCLSPTQNLTFPINMFYLAPNQSEVRLFFGCDSTKLPSTLQGNKIGCYAENETSSVVALYADDKNVSVVSKSCRDEVVYARVENGVKGGIEESLRNGFRLNWIASDCNQCNSTGGRCGFDKDIYSFRCYCTDRVHAAKCDPVTVAKKNGLTRNAKLGIGLGIGIPVILFIGSLLLLLLYKRKHAISVGHFQSSNSYSDSSINPRREIGSKYFGVPLFSYDELRKATNNFDHTKELGDGGFGTVYFGKLPDGREVAVKRLYEHNYRRVEQFMNEVNILTTLRHKNLVSLYGCTSRHSRELLLVYEYISNGTIACHLHGELAKPDLLPWSIRIKIAIETATALAYLHASGIIHRDVKTSNILLDDNFRVKVADFGLSRLFPEDATHVSTAPQGTPGYLDPEYHQFYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSNLATKKIQESAIDELVDPCLGFHSDNEVNRMIVSVAELAFQCLQKDTELRPSMEEVLDELRRIESGKDVVEVVEEVDVDGVGSSHSNVHPPPASPEWDEVGLLKSVKIMKHPSSPNTVTDKWESINTTPNASA* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0390 690 Pfam Wall-associated receptor kinase galacturonan-binding 41 105 IPR025287 GO:0030247
Mal1g0390 690 SMART serkin_6 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0390 690 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Mal1g0390 690 CDD STKc_IRAK 351 620 - -
Mal1g0390 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Mal1g0390 690 Pfam Protein kinase domain 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0390 690 Pfam Wall-associated receptor kinase C-terminal 169 248 IPR032872 -
Mal1g0390 690 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 26 689 - -
Mal1g0390 690 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Mal1g0390 690 ProSiteProfiles Protein kinase domain profile. 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0390 690 SUPERFAMILY Protein kinase-like (PK-like) 323 617 IPR011009 -
Mal1g0390 690 MobiDBLite consensus disorder prediction 668 690 - -
Mal1g0390 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 26 689 IPR044652 -
Mal1g0390 690 Gene3D Phosphorylase Kinase; domain 1 318 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0390 Mal-Chr1 4426230 4440052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0390 37 690 Receptor kinase-like Gene Family AT1G25390 45.619 1.64e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal1g0390 Pkinase 1.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0390 1 4426230 4440052 Mal1g0390 1 4426230 4440052 ECH