Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0387 ATGGCTCTAGTTTATGTAATACATTATAGGTTCCTCTTGTTCTCTCATTTGACTGTGCTACTGCTACTTGTCTTAACTAGTAAAGGAAATGGACACAGTGATGATTGTCCAGACTCATTTAATTGTGGAAATCTTGGGTTGATTAAACACCCTTTTACCACAGTTAAATTCCCAAACTGTGGTGCATTGGCAATTCAAGGTTGTGATGATATCAACATAAATGCTACGAAGCTCGTCCAGTTTACCAAAGGAGGAAAACTCTTTCAAGTTACAACCATTGATAATGACTGGCACAAGGGCAACCCAATTTCCATTGTTGATCCGAATTTCACCAATCTTTTGCAGAAAAATGCTTGTGAGGCCTTTAGCTATAATATTACTCTCCCTCCTCCCTCTCCTTTTGGAACTTTTTATATCAAAGACAACATAACAGCTTTCAAATGCAACCGTACCCAAAAATTAGTCGCCAAACCTCCAATTAATTTCTTCAAAAATAGTACATGTCCTCACTATGATTTTTACTTTGGTGATTCAACATTTGATAATGAGTCTAATCACTCTTTCATGTCATGTTCATCGTTTCATCTTCCTGTCATTGAATTAGGCTTTGCACTTTCTGGTAACCCATTTCGATTTTTAACTAAAGAAATTACCTTTCAGTTCCAATCTTCAGATGACTGTGAACGGTGTTATCACCGTGATAAAAAAAGCCATTGTCGTCTTGACAGAAATGGACAAATTTATTGCCCCGCAAGGAAGGGTAGAAGTTCAGCTTGGAAGCTAGGATTGGTTTTAGGAGTTGGTGTTGGACCATGGATCGTATTTGGATTGTTCATCACGCTATGGTACTACAAACGGAAATATGCCCCTGCACACATCCAATCCCAACCAAGCAACAACACTTATGTTGATCCTCACCCAAATCGTGAAACGGAGTCAAGCAAGCTCTTCTTTGGTGTACCTGTCTTCTCCTATGAAGAGCTTCAACAAGCAACAAACAATTTCGACAGCACTAGAAAGCTAGGAGATGGAGGTTTTGGCATTGTTTACTATGGGAAACTCAAAGATGGAAGGGAGGTTGCTGTCAAACACTTATTTGAGCACAATTACAGGAGAGTAGAACAGTTTGTGATTGAAATCGAGGTACTCGCTCGCTTGCGCCACAGGAATCTAGTTTCCCTCTATGGCTGCACATCACGTCACAGCCGTGAGCTACTGCTTGTATATGAATACATTCCAAATGGAACTGTTGCTAGCCATCTCCATGGTGATTTAGCTAGAGCCGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCAATAGAAACCGCTTCTGCATTGGCTTATCTACATGCTTCCGACATCATTCACCGTGATGTCAAAACCAACAACATTCTACTTGATATTAATTTTTCTGTTAAGTTAGCAGATTTTGGACTATCGAGGTTGTTCCCTAACGATGTCAGCCATGTTTCCACAGCTCCACAAGGAAGTCCAGGTTACCTTGACCCTGAATATTTTCAACTCTACAAGCTATCGGAGAAGAGTGATGTGTATAGCTTTGGCGTTGTGCTCATCGAGCTAATATCGTCTATGACAGTAATTGATTCTGCCAGAGAAAGAGAGGAAGTTAACTTGGCAAATCTAGCAGCAAAGAAGATAAGAAAAGGTGCAGTTGGGGAATTGGTTGACCCATCACTTGGTTTTGAATCAGATAGTGAAGTTAAAAGGATGGTAACTTCAGTGGCAGAATTGGCTTTTCAATGTGTACTAGGAGACATGGAATTAAGACCTTCCATGGATGAAGTTCTGCAAGAACTCAAGAAAATTGATGGTGGGAATTTTGAGTTTGATCATCGAGAGAAAGTACATGACAGTGCTGGCTCCTCGCAGTCCGAAGTACATTCACCAATAGTTGGAACTTCTATCAATAAGAAGCAAGAAATATCAACTTCACAAAAGTCATTGACTGAAAAATGGGAAAGTGAATCTATTACACCCAATGGTGAGATCATAACAGAGTTTGAGGATGGCCAAGCTGCAGAGATTCAAGCTCTTTGCGACACAATGCGGTGTGGAAAAGAGCCCAACGTTAAGCCCAAGGACAAGCCCGCTGATCCAGCTACCAAGGCCCAAAACAACCCTGCGGACTCTACTTGGGCTAAGCCTAACACGACCGCAACGCAGGCAGGGACACGTGGCGGTGTTAGAGATGGAGAAGAAGGAGAAAGATTCAATGCGGAGACACTCACTGAAAGATCTGTTTGTGTCATCGCCACCTAG 2283 0.4157 MALVYVIHYRFLLFSHLTVLLLLVLTSKGNGHSDDCPDSFNCGNLGLIKHPFTTVKFPNCGALAIQGCDDININATKLVQFTKGGKLFQVTTIDNDWHKGNPISIVDPNFTNLLQKNACEAFSYNITLPPPSPFGTFYIKDNITAFKCNRTQKLVAKPPINFFKNSTCPHYDFYFGDSTFDNESNHSFMSCSSFHLPVIELGFALSGNPFRFLTKEITFQFQSSDDCERCYHRDKKSHCRLDRNGQIYCPARKGRSSAWKLGLVLGVGVGPWIVFGLFITLWYYKRKYAPAHIQSQPSNNTYVDPHPNRETESSKLFFGVPVFSYEELQQATNNFDSTRKLGDGGFGIVYYGKLKDGREVAVKHLFEHNYRRVEQFVIEIEVLARLRHRNLVSLYGCTSRHSRELLLVYEYIPNGTVASHLHGDLARAGLLTWPIRMQIAIETASALAYLHASDIIHRDVKTNNILLDINFSVKLADFGLSRLFPNDVSHVSTAPQGSPGYLDPEYFQLYKLSEKSDVYSFGVVLIELISSMTVIDSAREREEVNLANLAAKKIRKGAVGELVDPSLGFESDSEVKRMVTSVAELAFQCVLGDMELRPSMDEVLQELKKIDGGNFEFDHREKVHDSAGSSQSEVHSPIVGTSINKKQEISTSQKSLTEKWESESITPNGEIITEFEDGQAAEIQALCDTMRCGKEPNVKPKDKPADPATKAQNNPADSTWAKPNTTATQAGTRGGVRDGEEGERFNAETLTERSVCVIAT* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0387 760 Pfam Protein kinase domain 336 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0387 760 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Mal1g0387 760 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 19 668 - -
Mal1g0387 760 SUPERFAMILY Protein kinase-like (PK-like) 317 609 IPR011009 -
Mal1g0387 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Mal1g0387 760 MobiDBLite consensus disorder prediction 711 732 - -
Mal1g0387 760 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 668 IPR044652 -
Mal1g0387 760 Gene3D Transferase(Phosphotransferase) domain 1 412 617 - -
Mal1g0387 760 MobiDBLite consensus disorder prediction 694 748 - -
Mal1g0387 760 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g0387 760 Gene3D Phosphorylase Kinase; domain 1 307 411 - -
Mal1g0387 760 SMART serkin_6 335 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0387 Mal-Chr1 4392385 4395999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0387 36 668 Receptor kinase-like Gene Family AT1G25390 42.946 6.09e-152 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mal1g0387 Pkinase 1.2e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0387 1 4392385 4395999 Mal1g0387 1 4392385 4395999 ECH