Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0376 ATGGATTCAAAGATGGAAGGAACGTCTGCACCAGCTATTAGACGTGATCCTTATGAAGTTTTGTCCGTTTCTAAGGAATCATCCGATCAAGAAATTAAAACCGCTTACAGAAAACTTGCTCTCAAGTATCACCCTGACAAGAATGCCAACAATCCTGAAGCTTCTGAACTATTCAAAGAGGTTGCATATTCTTATAATATCTTATCTGACCCAGAGAAGAGAAGGCAGTATGATAGTGCAGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATCGATTTATCTAATCTTGGGACTGTGAACACGATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCAATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTTTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACATCTGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCAGGGATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTATTTTGAACAAGATGCAAACGGTGGGTATGGTTTAGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCTGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTTTCGGAACTAAAGCCTGGCACACATATATTTGCCGTTTATGGCGATAACTTCTTTAAGACTGCTAGCTATACAATTGAAGCAGTATGTGCAAAATCACATGAAGATACCACCCAAAAACTTCAGGACATTGAAGCTCAAATTTTAAGAAAGAGGAATGAGCTACGGCAATTTGAATCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAGTCTGTTGATGAGCTTCTGAAACAACGGGACGGTATCCATTCTACCTTCACCATTGTCAAGCCAACCAATATTAGTGGAAGTGGCAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTTCTGGTGAAGATTCCAAAGGTGAGAGCCCTGGGGAAGATGGAGGGTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTCAACCTCAATCTTAAGGGTTCAGGTTCGGGTTCTGATAAGAGGTTGATTTAA 1251 0.4061 MDSKMEGTSAPAIRRDPYEVLSVSKESSDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDTTQKLQDIEAQILRKRNELRQFESEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSTFTIVKPTNISGSGSNLSNGSSSKISGEDSKGESPGEDGGSDGKDKSGKKKWFNLNLKGSGSGSDKRLI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0376 416 MobiDBLite consensus disorder prediction 356 376 - -
Mal1g0376 416 SUPERFAMILY Chaperone J-domain 15 86 IPR036869 -
Mal1g0376 416 Pfam DnaJ domain 16 78 IPR001623 -
Mal1g0376 416 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Mal1g0376 416 CDD DnaJ 16 70 IPR001623 -
Mal1g0376 416 Coils Coil 286 341 - -
Mal1g0376 416 PRINTS DnaJ domain signature 36 51 IPR001623 -
Mal1g0376 416 PRINTS DnaJ domain signature 73 92 IPR001623 -
Mal1g0376 416 PRINTS DnaJ domain signature 18 36 IPR001623 -
Mal1g0376 416 PRINTS DnaJ domain signature 53 73 IPR001623 -
Mal1g0376 416 MobiDBLite consensus disorder prediction 356 416 - -
Mal1g0376 416 Gene3D DnaJ domain 3 98 IPR036869 -
Mal1g0376 416 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 408 - -
Mal1g0376 416 MobiDBLite consensus disorder prediction 377 399 - -
Mal1g0376 416 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Mal1g0376 416 SMART dnaj_3 15 73 IPR001623 -
Mal1g0376 416 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0376 Mal-Chr1 4306757 4311896 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0376 7 88 C2H2 Transcription Factor Family AT1G74250 43.678 9.53e-14 71.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0376 1 4306757 4311896 Mal1g0376 1 4306757 4311896 ECH