Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0355 ATGAACACCACTAGAACATTAGCTATGTCCACAACTACAAAGAAAGAGTTTGGTAATTCTAAAGAAGAAAATGAGCTGAGAAGAGGACCTTGGACTCTTGAAGAAGATAGCTTACTAATACACTATATTGCTCGTCATGGTGAAGGTCGTTGGAATATGTTAGCCAAAAGTGCAGGATTGAAGAGGACTGGAAAAAGCTGCAGACTCAGATGGTTGAATTACTTGAAACCTGACATTAAGAGAGGGAACCTTACACCACAAGAACAATTGTTGATCCTTGAACTTCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAACATCTACCGGGAAGAACAGATAATGAGATAAAGAACTATTGGAGAACAAGGGTGCAAAAACAAGCACGCCAACTTAACATTGAATCTGGTAGCAAGAGATTCATTGATGCTGTTAAGTGTTTTTGGATGCCAAGATTACTTCAAAAGATGGAACAGAATTCTTCTCCAAGCTCTGATCACTCTTCTATGACAAATATGAATAATTTTGGGAATTCTATTGAGGCTTCAACTAGTAATTCAATGTCAACAAGCTTCAATATTCCATCTATGTCTCCATCATCCCATCCACAGAGAGGATTCATAGATGCTTCAAGTGCAAATCATTTAAGTACTATGTCAACCAGCTTCAATAATCCTTCTTTGGATTTCTTCCAATTTTCACAGCCACTTGAAATTTCAGAAAACTCAAAAAGTGCTCCAAATGTGTTTGAGAACCATGTTTATAACTGTCCAATCCAAGACAATTTCTGCATTGATGATACCAATAACTATGGCTTGGAAGGTCTAAACTTTGATCCACTTTCTTCAATGGAAACTTGTGATTTTTCACAGTTTGATTTTCAAACTACAGATAGTGGCTGGATGCTAGACAACATGGGTAATGCTCTGTGGAACATGGATGCTATGTGA 954 0.3763 MNTTRTLAMSTTTKKEFGNSKEENELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFIDAVKCFWMPRLLQKMEQNSSPSSDHSSMTNMNNFGNSIEASTSNSMSTSFNIPSMSPSSHPQRGFIDASSANHLSTMSTSFNNPSLDFFQFSQPLEISENSKSAPNVFENHVYNCPIQDNFCIDDTNNYGLEGLNFDPLSSMETCDFSQFDFQTTDSGWMLDNMGNALWNMDAM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0355 317 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Mal1g0355 317 MobiDBLite consensus disorder prediction 1 15 - -
Mal1g0355 317 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 9 315 - -
Mal1g0355 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Mal1g0355 317 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Mal1g0355 317 CDD SANT 85 124 IPR001005 -
Mal1g0355 317 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g0355 317 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 9 315 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mal1g0355 317 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 43 52 IPR001345 GO:0003824
Mal1g0355 317 CDD SANT 30 75 IPR001005 -
Mal1g0355 317 SUPERFAMILY Homeodomain-like 26 122 IPR009057 -
Mal1g0355 317 Pfam Myb-like DNA-binding domain 81 124 IPR001005 -
Mal1g0355 317 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Mal1g0355 317 Gene3D - 84 126 - -
Mal1g0355 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Mal1g0355 317 SMART sant 80 128 IPR001005 -
Mal1g0355 317 SMART sant 27 77 IPR001005 -
Mal1g0355 317 Gene3D - 25 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0355 Mal-Chr1 4005907 4007421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0355 23 215 MYB Transcription Factor Family AT1G68320 63.033 6.91e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g0355 Myb_DNA-binding 3.3e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0355 1 4005907 4007421 Mal1g0355 1 4005907 4007421 ECH