Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0347 ATGCCAACAACAACAACACAACCTTCATTTCTCTCACCTCACTCTCAACGTCATTATCATAAACCCATTCAATTTCACCACTCTTCGCACACCCTTTTCACTCCTTCCACCACCACCCACACCAGGCGGCGGCCCCACTGCCCTCGCATGGAAATATCCTCCTCACGCCACCGCTGGAAAGACAAAGTCATCGTTATAGTCGGCGCAACCGGCTCCGGCAAATCACGTCTCTCCGTTGAACTCGCAACCCTCTTCCCCTACTCCGAAATAATCAACTCCGACAAAATCCAAGTCTACAGAGGACTCGACATCACCACCAACAAGATCCCTTTTCATCAACGCAACAACGTTCCACATCATCTTCTCGGCGACGTTGATCCTTCTCACGGCGAGTTCTCACCTTCAGATTTCCGCCGCCATGCCGGAGATATCATCTCCGATATTACTTCCCGGGGAAATCTTCCCATTATCGTTGGTGGGTCCAACTCATTCATTCACGCTCTTCTTGTAGAACGATTCAACCCTGAGTCAAACGTTTTCGACGAGTCATCGTCGTTAACATCGATATCCTCGGATTTAAGGTACAAATGTTGTTTTCTTTGGATGGATATTTCGTTTCCTGTGTTGTCGGAATATTTGCTGAAACGAGTCGATGACATGTTTGACTCGGGAATGGTGAACGAGTTAGCCGAGTTTTACGAACCAGATTCGGATAACCGAACCGGGTTGAGAAAAGCTATCGGTGTACCCGAGTTCGACCGGTTTTTTAAACAATATCCACCGGTTGGACCAGATGAATCTGAACGTCATGATCCTATGCGGGAAGGTGCATATGAGGAAGCAGTGAAGGCGATTAAAGATAACACGTGTCAGCTAGCTAAGAGACAGATAGGGAAGATCCTACGGTTAAAACGAGCTGGGTGGGACCTACAACGGATTGATGCCACGGAGGCGTTTAGGGCGGTGCTTACGTCAGAGTCTCACGGCGGTGACGACGGTGGAGAAGGGTTTTCCGATGTGTGGAAAAAGCAAGTGTTGGAAGCAAGCGTGAAGATTGTGAAGCGATTCTTGATGGAGTAG 1080 0.4861 MPTTTTQPSFLSPHSQRHYHKPIQFHHSSHTLFTPSTTTHTRRRPHCPRMEISSSRHRWKDKVIVIVGATGSGKSRLSVELATLFPYSEIINSDKIQVYRGLDITTNKIPFHQRNNVPHHLLGDVDPSHGEFSPSDFRRHAGDIISDITSRGNLPIIVGGSNSFIHALLVERFNPESNVFDESSSLTSISSDLRYKCCFLWMDISFPVLSEYLLKRVDDMFDSGMVNELAEFYEPDSDNRTGLRKAIGVPEFDRFFKQYPPVGPDESERHDPMREGAYEEAVKAIKDNTCQLAKRQIGKILRLKRAGWDLQRIDATEAFRAVLTSESHGGDDGGEGFSDVWKKQVLEASVKIVKRFLME* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0347 359 Gene3D - 60 357 IPR027417 -
Mal1g0347 359 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 206 310 - -
Mal1g0347 359 Pfam IPP transferase 97 173 - -
Mal1g0347 359 Pfam IPP transferase 190 297 - -
Mal1g0347 359 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 53 358 - -
Mal1g0347 359 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 53 358 IPR039657 -
Mal1g0347 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0347 Mal-Chr1 3934376 3935455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0347 194 349 C2H2 Transcription Factor Family AT2G27760 29.500 1.33e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0347 1 3934376 3935455 Mal1g0347 1 3934376 3935455 ECH