Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0331 ATGTCGAGTTCTAGAAAATCTAGAGCTAGACAAAGGCCTAACCCTTTGAAAGAATCCAAATTGATGACAAGGAAATTGCGTGTTGTTTATGATGATCCTGATGCAACTGATTCATCTGAAGATGAGTCACAACAACCAAGAACTACAACAAAAAGAAGCTTCGTTGAGGTTACTCTCCCTCCTTTTGTATCTGCAGTTTCCTTGGCTTCTCACAACAGTTTCCCTGTTAAGCAAAAGACATCAACAAGGAGAAAGACACCATGTCTTTCAGCAAAACCTCGAACCAATAAGAAGGTTGTTCCACCAACAGCAACAACAGGAGGGAGACAATCTTCTGCCAAATACCGAGGCGTTCGTATGAGGAAATGGGGAAGATGGGCTGCTGAGATTCGCGATCCTTTCCGAAATGTTAGAATTTGGTTGGGAACTTACAACACTGCTGAAGATGCTGCTTATGCTTATGAATCAAAAAGGCTTCATTTTGAACTTAGACATCAGGCAATGGACGCTAGAACATGCATCAAGAAAAGGTCTTCTTCTGTAGCTTGCATCAAGAAAAGGTCCCCTCGTTCAGCTGCTGCATCAAACAACTCTTCTGCAAATGTTGATGCTGTTGTGTCAGAGAAATTTTCAACTACTGAAGACTCTGAGAGTTTGTTCTCGCACACATCGCCATCTTCCGTGCTTGAGTTGGATACCTTAGCATCCAATTTGACTGAGAAGTTTGATGATGTTCCATCAAACAATGAAATTGGGGCTGTTGATGAAGCTAAAGAAATGGTGGTTTGTCAACTTGAAGAGCTAGAAATTCCAGATCTGACTGTGTTGAACTTGGCTGAGCCAATTGCTACAGAGAATCCAATTGGGACTGATCCCAATCTCGGTTTTGGATTTGACTTTGATCGGTTTAACATTGATGATTTTGGACCGAATTTTGATGAATTTGGTGACTTTGATGTCGGTGACTTCTGTGATTTCAGCGATATTCAAGTTCATGGGTTTGATGACAATGAGCATAGTGAGCTTCCTGATTTCGATTTTGGTGTTATTGGTGATGATGATGAATTTGCTGGTTGGATTGAGGAACCCCTCCAACACAACATACCTTGTGTCTAA 1116 0.414 MSSSRKSRARQRPNPLKESKLMTRKLRVVYDDPDATDSSEDESQQPRTTTKRSFVEVTLPPFVSAVSLASHNSFPVKQKTSTRRKTPCLSAKPRTNKKVVPPTATTGGRQSSAKYRGVRMRKWGRWAAEIRDPFRNVRIWLGTYNTAEDAAYAYESKRLHFELRHQAMDARTCIKKRSSSVACIKKRSPRSAAASNNSSANVDAVVSEKFSTTEDSESLFSHTSPSSVLELDTLASNLTEKFDDVPSNNEIGAVDEAKEMVVCQLEELEIPDLTVLNLAEPIATENPIGTDPNLGFGFDFDRFNIDDFGPNFDEFGDFDVGDFCDFSDIQVHGFDDNEHSELPDFDFGVIGDDDEFAGWIEEPLQHNIPCV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0331 371 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 MobiDBLite consensus disorder prediction 74 89 - -
Mal1g0331 371 Pfam AP2 domain 114 158 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 Gene3D AP2/ERF domain 113 169 IPR036955 GO:0003700|GO:0006355
Mal1g0331 371 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 6 369 - -
Mal1g0331 371 CDD AP2 113 154 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 SMART rav1_2 114 181 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 MobiDBLite consensus disorder prediction 1 53 - -
Mal1g0331 371 MobiDBLite consensus disorder prediction 11 47 - -
Mal1g0331 371 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Mal1g0331 371 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 369 - -
Mal1g0331 371 SUPERFAMILY DNA-binding domain 114 161 IPR016177 GO:0003677
Mal1g0331 371 MobiDBLite consensus disorder prediction 74 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0331 Mal-Chr1 3614667 3615782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0331 1 370 AP2-EREBP Transcription Factor Family AT1G68550 30.526 2.79e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal1g0331 AP2 1.8e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0331 1 3614667 3615782 Mal1g0331 1 3614667 3615782 ECH