Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0307 ATGGAAAGCTTCAACACAACTGAATCAACCTCACCACTCTATTCCCATTCTTCCTTCTTGCTTCGGGGAGATGAAGATGAACTCAACATAAATCCAACGCGTTTCTTCCATCCTCAACTTTCTTTACAACATCACCACCATGCTGTTGATTTAAGCTCAAGTTCTGTGTTTGGTGCAAAGTCTAACAATGTCGCTTTTGTTTCAAGTAACTTGCAGTACAGAACATTCAACACAAACATTGGTTCAGCTTCTTCTTCAGGCATGGCAGATAACAGTCAAAAGACAGAAGATACTTCAACAGAAGATATTGACACTGATGATAAAAACAACCAATGTTTTTCGACCGTGTCTTGGTGCAATGGTGTTGGGAATGAGGCTCTTGTAGTTGTTGACTCCAAGGATCAATGTAAGACTAAGGGTCAATCTGAAGAGCACAAGACTCTTCGTAGGTTGATGCAGAATCGCGAGGCTGCAAGGAAAAGTCGGTTAAGGAAAAAGGCATATGTGCAACAATTGGAAAACAGTCGACTTAGGCTTGCTCAAATAGAACAAGAGCTTCAACAAGGTGCATTTGTTGCTACCGGAGTTACAGCCGATCATGGTCCTTCAATTGTTGGAAACAGTAATTCAGGTGCGGTAGCATTTGATATGGACTATGCTCGTTGGGTCGATGAGCATCAACGACTAATCAATGACATAAGATCAGCTTTAAATTCTCATATGGGCGATAATGAACTGCATCTTCTTGTTGATGGTGTAACAGCACATTATGATGAGCTATACAAGTTGAAGAGCATAGGCGCAAAGGCTGATGTATTTCACATACTTTCTGGGTTGTGGAAGACACCTGCAGAAAGATGTTTCATGTGGCTCGGTGGATTCCGTTCATCCGAACTTCTCAAGATAATTAGAAACCACCTCGAGGCGTTAACAGATCAGCAGTTGATGGCGATCTTCAATCTGCAGCATTCTTGTCAACAGGCTGAAGATGCATTATCTCAAGGCATGGAAGCATTGCAACAAACTCTTTCAGAGACACTTTCCTCCACTTCCACTGGATCTGGAAATGTTGCTGAGTATATGGGCCAAATGGCTCTTGCAATGGCCAAACTTGCCACACTTGAGACTTTCATTCATCAGGCTGATCTCTTGAGGCAACAAACACTTCAACAGTTGCGTCGGATTTTGACCACGCACCAAGCTGCTCGTTCTCTCCTTGCCATAAATGATTTCATTTCGCGAATTCGAGCTCTTAATTCATTATGGTTAGCATGTCCTAAAGAACACTAA 1290 0.4233 MESFNTTESTSPLYSHSSFLLRGDEDELNINPTRFFHPQLSLQHHHHAVDLSSSSVFGAKSNNVAFVSSNLQYRTFNTNIGSASSSGMADNSQKTEDTSTEDIDTDDKNNQCFSTVSWCNGVGNEALVVVDSKDQCKTKGQSEEHKTLRRLMQNREAARKSRLRKKAYVQQLENSRLRLAQIEQELQQGAFVATGVTADHGPSIVGNSNSGAVAFDMDYARWVDEHQRLINDIRSALNSHMGDNELHLLVDGVTAHYDELYKLKSIGAKADVFHILSGLWKTPAERCFMWLGGFRSSELLKIIRNHLEALTDQQLMAIFNLQHSCQQAEDALSQGMEALQQTLSETLSSTSTGSGNVAEYMGQMALAMAKLATLETFIHQADLLRQQTLQQLRRILTTHQAARSLLAINDFISRIRALNSLWLACPKEH* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0307 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 149 164 IPR004827 GO:0003700|GO:0006355
Mal1g0307 429 PANTHER TRANSCRIPTION FACTOR TGA9 43 428 - -
Mal1g0307 429 Pfam Seed dormancy control 230 304 IPR025422 GO:0006351|GO:0043565
Mal1g0307 429 MobiDBLite consensus disorder prediction 80 94 - -
Mal1g0307 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 144 188 IPR004827 GO:0003700|GO:0006355
Mal1g0307 429 Pfam bZIP transcription factor 143 174 IPR004827 GO:0003700|GO:0006355
Mal1g0307 429 Gene3D - 146 189 - -
Mal1g0307 429 ProSiteProfiles DOG1 domain profile. 212 425 IPR025422 GO:0006351|GO:0043565
Mal1g0307 429 SUPERFAMILY Leucine zipper domain 146 187 IPR046347 GO:0003700|GO:0006355
Mal1g0307 429 Coils Coil 165 185 - -
Mal1g0307 429 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 43 428 - -
Mal1g0307 429 SMART brlzneu 142 195 IPR004827 GO:0003700|GO:0006355
Mal1g0307 429 MobiDBLite consensus disorder prediction 80 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0307 Mal-Chr1 3382040 3385085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0307 3 428 bZIP Transcription Factor Family AT1G68640 51.566 3.14e-141 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g0307 DOG1 8e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0307 1 3382040 3385085 Mal1g0307 1 3382040 3385085 ECH