Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0306 ATGATGGATTCTCCCTCTTTCTCCTCTTCCTCCTCTGATTTTGCTTCCGCTAATCAGAGTGCATCCCGGAGTAGGAGAAGTGGCGGTGGTAGCAGTGAAGTGACTGAACAATCGCGACCGTGGCACGATGTTTTCTGGTTAGGAATATTTGTGATCCATTTGATTGGGCTGGGATTTCTTTTGGGGGTTCTTGGTCTCAATAGGTTTGAGAAAGAGAATAGACTCAACATTGATAAGTACACCCCTGGTCTTTCTGGGAATCATGCTGGATTGACCGAGACTTACTGGCCGCTTTATGCGGCTGCTGGTGGAATTGGGACTGTTCTTGGATGGACTTGGATGTTGTTGTTGGGTTCCCAGGCTACTCAAATGATGAAGGTTTCAGTCCACATCCTCACCACTTATTTGGCTGTCATAAGTGTTTTGTGTTTCTGGACTGACCAGATTTTCTGGGGGGTTGCTTTTGCTGTTGGGGCTGCTCTTCAGTTCTTGTATGTTATATCCGTCATAGACAGACTTCCATTTACGATGCTGGTTCTGCAAAAAGCTGTGAAGATGGTTTGGAATCTTCCTGAGGTTATGAGAGTGTCATATGCATTTATGTTTGCTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCAGGTGTCGTGGCTTCAAACTTGAGTGATGGGGGACGCTGGTGGCTTCTTGTGGTTTTCTCGGTAAGCTTATTTTGGACAGGTGCGGTGCTCTGTAATACTGTGCATGTTATAGTGTCTGGGACAGTGTTTCTTGTTCTTCTCTATGGTGGTAGAGAGGCAGCTTCAATTCCTGCTAACTCCTTAATGAAATCTTTGCAATATGCTTTAACAACATCTTTTGGTAGCATTTGTTATGGCTCATTATTTACTGCTGCAATCAGGACACTGCGATGGGAGATACGTGGACTTCGGTCAAAAATTGGCAACAATGAGTGTTTGCTTTGCTGTGTTGATTTCCTTTTTCATCTTGTGGAGACTCTTGTTCGATTTTTTAACAAATATGCCTATGTTCAGATAGCTGTTAATGGTAAAAGCTTTAACAATTCGGCTAGAGATGCGTGGGAGTTATTTCAATCAACTGGGGTTGAGGCACTTGTGGCATATGATTGTTCAGGTGCTGTCCTGCTAATGTGCACCGTTTTTGGTGGATTGATAACTGGAACTTGCGCTGGTGTTTGGGCATGGGTTAAATGGAGTGACAGAGTTATTATGATTGGCTCCACATCCATGCTCATGGGTATGGTTTTGGTTGGATTGGCAATGGTTGTGGTGGAGAGTGCTGTTACATCTATATATATTTGCTATGCAGAAGACCCTTTATTGATTCAGAGATGGGATGCTGAATTTTTCAACCAGATGTCTGAGACACTACATCACCGACTTCAATATAGGAGTGCTCGAGCCAGGGACTATCGATTCCATGATGACCCTATACGAGAAAACGCCTCTATTTGA 1482 0.4393 MMDSPSFSSSSSDFASANQSASRSRRSGGGSSEVTEQSRPWHDVFWLGIFVIHLIGLGFLLGVLGLNRFEKENRLNIDKYTPGLSGNHAGLTETYWPLYAAAGGIGTVLGWTWMLLLGSQATQMMKVSVHILTTYLAVISVLCFWTDQIFWGVAFAVGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALWSFGAAGVVASNLSDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGTVFLVLLYGGREAASIPANSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGLRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVNGKSFNNSARDAWELFQSTGVEALVAYDCSGAVLLMCTVFGGLITGTCAGVWAWVKWSDRVIMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLHHRLQYRSARARDYRFHDDPIRENASI* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0306 493 Pfam Plasma-membrane choline transporter 154 448 IPR007603 GO:0022857|GO:0055085
Mal1g0306 493 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 15 488 IPR007603 GO:0022857|GO:0055085
Mal1g0306 493 MobiDBLite consensus disorder prediction 1 36 - -
Mal1g0306 493 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 15 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0306 Mal-Chr1 3372305 3376175 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g0306 1 3372305 3376175 Mal1g0306 1 3372305 3376175 ECH