Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja6g2959 | ATGCATATATATAAACCCACTTGTATAGTATTTCCTCCTAAACGCCAACCAAAACCTTCCTTATTAAGAATAATCCTTCTCTCTCTCTCTCTCTTAGAAATGGCCGAAGTGGAAAGAAGCCAAGAGAGTGAGGGGATTAAGCTGTTTGGTGCAATGATTACTTTGCATGATAGGAAAGTAATTAACGAGGGAGAAAAAGGAAGCGAAGAAGATGAAGATGAGACGGTGGAGAAGAAGTCAGAGAAGATGATAGAGTGTCCAAGATGCAATAGCACGGAGACCAAATTCTGTTACTTCAACAACTACAACGTTAATCAGCCAAGGCATTTCTGCAAGAGCTGCAAGAGGTACTGGACCGCTGGTGGGGCCCTTCGAAACGTTCCGGTTGGAGCTGGCCGGCGGAAGGCCAAGTCGCCGCCGCCATGCCATGGAGCCGATGGACTCATGGAGGGTAATTCCGATGATGACCAGTTTGGGTTGGTTTTGGATAAATGGCACGTTGCCAAGGCGTCTCAGAGTGATTTCCGGCATGCTTTTCCGGCCAAGCGGCGGAGGACAAACCCAGCTCAACGTACGTCAAGATCAATGAACCCCTTATTATGA | 603 | 0.4743 | MHIYKPTCIVFPPKRQPKPSLLRIILLSLSLLEMAEVERSQESEGIKLFGAMITLHDRKVINEGEKGSEEDEDETVEKKSEKMIECPRCNSTETKFCYFNNYNVNQPRHFCKSCKRYWTAGGALRNVPVGAGRRKAKSPPPCHGADGLMEGNSDDDQFGLVLDKWHVAKASQSDFRHAFPAKRRRTNPAQRTSRSMNPLL* | 201 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja6g2959 | 200 | ProSiteProfiles | Zinc finger Dof-type profile. | 84 | 138 | IPR003851 | GO:0003677|GO:0006355 | |
Lja6g2959 | 200 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 39 | 188 | - | - | |
Lja6g2959 | 200 | ProSitePatterns | Zinc finger Dof-type signature. | 86 | 122 | IPR003851 | GO:0003677|GO:0006355 | |
Lja6g2959 | 200 | PANTHER | CYCLIC DOF FACTOR 2 | 39 | 188 | IPR045174 | GO:0003700|GO:0006355 | |
Lja6g2959 | 200 | Pfam | Dof domain, zinc finger | 82 | 138 | IPR003851 | GO:0003677|GO:0006355 | |
Lja6g2959 | 200 | MobiDBLite | consensus disorder prediction | 176 | 200 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja6g2959 | Lja-Chr6 | 58531336 | 58533153 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja6g2959 | 40 | 185 | C2C2-Dof Transcription Factor Family | AT2G34140 | 53.086 | 4.72e-52 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Lja6g2959 | zf-Dof | 1.3e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja6g2959 | - | - | vra:106779806 | 201.445 |