Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1685 ATGATGATGATGTTTGATGATATTGGGCTATCTGGTGATTTGGATATGTTATCTGGCCCCCTCGGAGAAGGGGATATTACCGCCCGGCAATCTGAGCCAGAGGTGATAGTTGAGGATGATTATAGTGATGAAGAAATCGATGTGGACGAGCTTGAGAAGAGGATGTGGAGGGATAAAATGCGTCTTAAGCGATTGAAGGAACAAACTAAACCTAAGGAAGGAATTGATGCTGCGAAGCAGAGGCAGTCCCAAGAGCAGGCGAGGAGGAAAAAGATGTCAAGGGCTCAAGATGGAATCCTGAAGTACATGCTGAAAATGATGGAGGTTTGTAAGGCCCAAGGGTTTGTATATGGGATAATTCCCGAGAAGGGAAAGCCCGTGACCGGGGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTTAGGTTTGATCGCAACGGTCCAGCTGCCATAGCCAAGTATGAAGCAGATAACGCAATCCCAGGGAAGAATGACGGATGCAATTCTATCGGTCCGACTCCACACACCTTGCAAGAGCTACAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCCCCTCAGAGGCGGTTTCCATTGGAGAAGGGTGTTCCTCCGCCATGGTGGCCCACAGGGAACGAAGAATGGTGGCCGCAGATTGGAATACCTAAAGATCAAGGTCCTCCACCTTACAAGAAACCTCATGACCTGAAGAAAGCGTGGAAGGTTGGTGTTCTGACTGCAGTCATCAAGCACATGTCTCCTGATATTGCAAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAAATGACAGCCAAGGAAAGTGCAACATGGCTTGCAATCATCAATCAAGAGGAGTCCTTGGCACGCGAGCTTTACCCTGATTATTGTCCCCCATTAGCCTCAGCTGGAGGCAGGGGATCTTTGAACCCCATCGATTGCAATGAGTATGATGTTGAAGGCGCCGAGGATGAGCAGAATTTTGATGTGGAAGACATGAAACCTGAGAATCTTCATGCATCCAATCTCGGGATGGACAGAATGAGGGTAAGACTGCCACTTCAGCAGCCTTCTTTTGCAATCAAGGGAGAGGCTGTAACAAACTTGGATTTCATGCGGAAACGGAAGATCTCTAGCGACTTCGACATGATGATGGATCAGAAAATTTACACCTGTGAACATCTACAATGTCCTTACGGTGAAGTTCGCCTTGGTTTTCAAGACAGGACTTCGAGGGACAATCATCAATTGAATTGTCCATACAGAGGAGCTTCTTCAAATTATGGCGGTCCAAATTTCCATGTTAATGAGGCAAAGCCAGTCATATTTCCCCAGTCCTTTGTTCAACCCAAATCGACTGCTCAGTCTGTTAATTTGGTTCCACCTTCAATTGATCTAACCGGGCTCGGAGTTCCTGAAGATGGCCAGAAAATGATTGGTGACCTCATGTCAGTCTATGATACAAATGTTCAAGGCAGCAAAAATCTAAGTTCCAGTAACCGTGTCGTTGCTGCAGAAAATCCGAACGTTCCACAGCCCAGCATTCAGCAGCAGCAGGGCATTCAGCAGCAACAGGGCAGTTTCTTTCGCGGTCACAGTGTCATTATGGAAGGAAACTTCTTTGAAGAAGCCAACATATCCACCAATCATCACATGTTTGCAAGAGAGGAAAATCAGTTTGACCGGTTCAAAGCTTTGAATTCTCCTTTTGAGGCCCCCCATCAAAGCAGCAACAATAATTTCCATTTGATGTTTGGGTCCCCTTGTGATTTGGCATCCTTTGATTTCAAGGAGGACATGCAACAAGGAGTAGGCATGGAGGCACATCAAAAACAGCCAGATATTTCAATTTGGTACCAGTGA 1893 0.4633 MMMMFDDIGLSGDLDMLSGPLGEGDITARQSEPEVIVEDDYSDEEIDVDELEKRMWRDKMRLKRLKEQTKPKEGIDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYEADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGIPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPDYCPPLASAGGRGSLNPIDCNEYDVEGAEDEQNFDVEDMKPENLHASNLGMDRMRVRLPLQQPSFAIKGEAVTNLDFMRKRKISSDFDMMMDQKIYTCEHLQCPYGEVRLGFQDRTSRDNHQLNCPYRGASSNYGGPNFHVNEAKPVIFPQSFVQPKSTAQSVNLVPPSIDLTGLGVPEDGQKMIGDLMSVYDTNVQGSKNLSSSNRVVAAENPNVPQPSIQQQQGIQQQQGSFFRGHSVIMEGNFFEEANISTNHHMFAREENQFDRFKALNSPFEAPHQSSNNNFHLMFGSPCDLASFDFKEDMQQGVGMEAHQKQPDISIWYQ* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1685 630 Gene3D - 81 157 IPR023278 GO:0003700|GO:0005634
Lja6g1685 630 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Lja6g1685 630 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 629 IPR006957 GO:0005634
Lja6g1685 630 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Lja6g1685 630 Coils Coil 48 68 - -
Lja6g1685 630 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 629 - -
Lja6g1685 630 MobiDBLite consensus disorder prediction 65 92 - -
Lja6g1685 630 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1685 Lja-Chr6 43942284 43945503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1685 3 629 EIL Transcription Factor Family AT3G20770 61.315 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja6g1685 EIN3 5.9e-131 No_clan