Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0290 ATGATGGTGATCAGTGAAGAAATCGATCCTTACGCGCGAGGAGGAGACACCGATGGGGACACAGAAGCCGAAAGCATCGACTACGACCAGCTGAAAAAGCGCATGTGGAAGGACAGGATCCTACTACAGAAGATGAAGGAAAAACGAGACCAAGATGAGACAGAGCAGCAAGCAAAACAAGAAGCATCGATAAAGAAGAAGATGTCAAGAGCACAAGATTCAGTGCTCAAGTACATGGTGAAGATCATGGAGGTATGCAACGCTCAAGGCTTTAGCCTTAGGGGGTGGTGGAAAGAGCAAATCCGGTTTGACCAAAATGCTCCCCAAGCTTTGTCCAAGTACTTACCACTCCTTGAAAATAGTGACAACATGGATCTTTCTTCCTACATACACCTCCTTCAGGACATGCAAGATTCAACTTTAGGCTCTTTGCTTTCTGCTCTCATGCAACACTGCATCCCTCCCCAGAGGAGGTTCCCTCTGGAGAGGGGTGTCTCACCCCCTTGGTGGCCCACAGGGATTGAGATGTGGTGGGGTGAGCAAGGCCTCCTGGCCCAAGAACAAGGCCCACCTCCTTACAAAAAGCCCCATGACTTGAAAAAGGCTTGGAAAGTTTCTGTCCTGGCTGCTGTTATCAAACACATGTCTCCTGATTTGGATAGATTGAGGAGGTTGGTGACTCAGTCTAAGACGTTGCAAGATAAGATGACAGCCAGGGATAGTGCAACCTGGTCCAGAGTGATGAACCAAGAAGAGGCTTTGATGAGACTAACCAACAAGTGCCTAAAGATAACAGATGAGGATGAAAAAAACCAGGAGGAGGGTGAAAGCTCTGGCTCTACTGATCTTGGTTTAGATGATGGATTGATTTTGGGAAGCAAACATGAGAAGAGGAAGTGGGTGTTTGAATTTGGTGAAGCTTCTGGTGGTGATAATATATATGCTTGTCACAACGTAGAGTGTCCACAAAGTGAATTGACCCTTGGATTTGTGGATAGGAACTCGAGGATAGATCATGAATCACACTGTGATTACCGCAATGATGCACGATTACTCGCAAATTTAGATGATTGGATGAATATGGAGATTGTGGGGGATGAACAAAATGATGTAGGTGAGAATCTGAATTCTGCGGGAGAGATTGATCAAGGTGGGGCATTAATTGAATGCAACACAAGAAACTGGCTGGATTGCTTTGAGGATCATGAATTGCAAGAGGCTCTGGAATTGGTCCAACGTAGTGTGGATTCGACTCAAAATCCAGCGCATAGCTCACAAGGCTCAGAGGAAGAACCCTCAATTTGGGATTTCGCATACAATCCGGTGCAAGATAACGTGTTCGACACGCAATAG 1353 0.4612 MMVISEEIDPYARGGDTDGDTEAESIDYDQLKKRMWKDRILLQKMKEKRDQDETEQQAKQEASIKKKMSRAQDSVLKYMVKIMEVCNAQGFSLRGWWKEQIRFDQNAPQALSKYLPLLENSDNMDLSSYIHLLQDMQDSTLGSLLSALMQHCIPPQRRFPLERGVSPPWWPTGIEMWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLAAVIKHMSPDLDRLRRLVTQSKTLQDKMTARDSATWSRVMNQEEALMRLTNKCLKITDEDEKNQEEGESSGSTDLGLDDGLILGSKHEKRKWVFEFGEASGGDNIYACHNVECPQSELTLGFVDRNSRIDHESHCDYRNDARLLANLDDWMNMEIVGDEQNDVGENLNSAGEIDQGGALIECNTRNWLDCFEDHELQEALELVQRSVDSTQNPAHSSQGSEEEPSIWDFAYNPVQDNVFDTQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0290 450 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 20 443 IPR006957 GO:0005634
Lja6g0290 450 MobiDBLite consensus disorder prediction 415 435 - -
Lja6g0290 450 MobiDBLite consensus disorder prediction 1 26 - -
Lja6g0290 450 Gene3D - 123 261 IPR023278 GO:0003700|GO:0005634
Lja6g0290 450 MobiDBLite consensus disorder prediction 266 285 - -
Lja6g0290 450 MobiDBLite consensus disorder prediction 11 26 - -
Lja6g0290 450 MobiDBLite consensus disorder prediction 415 431 - -
Lja6g0290 450 Coils Coil 42 62 - -
Lja6g0290 450 PANTHER ETHYLENE INSENSITIVE PROTEIN 20 443 - -
Lja6g0290 450 MobiDBLite consensus disorder prediction 46 66 - -
Lja6g0290 450 Pfam Ethylene insensitive 3 30 252 IPR006957 GO:0005634
Lja6g0290 450 SUPERFAMILY DNA-binding domain of EIN3-like 130 255 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0290 Lja-Chr6 7168400 7169803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0290 2 345 EIL Transcription Factor Family AT5G10120 51.882 5.91e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lja6g0290 EIN3 2.8e-89 No_clan