Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3366 ATGGTTTTGGTTCATCCAGTAGGAGTAGGAGTAGGAGTAGGAGTTGGGGTTTGCCGTGGTTTCCTGTCTCTCTCTGTAAGTTATGCCGCAAAAGTAAAACCGAGAAGAAGGTTCTTCTGTAATGCTTCATGGCAAGAGCTTGCGGGAGTTTTACTATTCTCAGCGATCCCTTTCACTGCCGTGAAAGCCATAGCTAATAGTCCGTTAGGTGAGTCGCTTCGGAGGAACATGGAGGAGAAAAAGAAATTCGCTCTAGAAAACTCGTCCAAATTCAACGCCTTGGCCGACCAGGCCCAAAAGGAGAGCTTTTGGTATGGAGAAAATCGGCCTCGTTGGCTTGGTCCTATTTCTTCATATGTCTACCCATCATATCTTACTGGGGAACTGCCTGGGGACTATGGCTTTGACATCGCTGGCTTTGCCAAGGATCCTGTCGCATTGCACAAATACTTCAACTTCGAGATTTTGCATGCTCGGTGGGCTATGCTTGCATCTCTTGGTGCTCTAATTCCTGAATTATTAGACCTATTTGGAGCCTTTCACTTTGTAGAACCTGTCTGGTGGCGTGTTGGCTATTCAAAGCTCAAGGGAGATACTCTAGATTACCTTGGCATCCAAGGTCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGTCAAGCACTTCTTATGGTTGGACCAGAGTACGCTAGATATTGTGGGAGTGAGGCATTGGAGCCTCTAGGAATATATCTACCTGGTGATATAAATTATCCTGGAGGAGCATTGTTTGATCCTTTAAATCTTTCAAAAGATCCTGAAGCATTTGCAGAGCTGAAGGTGAAAGAAATAAAAAATGGACGCTTAGCAATGATTGCCTGGTTAGGCTTTTACATGCAAGCAGCTCTGACGGGTAAAGGTCCGGTGCAGAACCTTCTGGATCACTTCTCAGATCCATTTCACAACAACTTGCTGGGCTCCCTCAACTTCTTGAAAGTAATCAAGTATTAG 999 0.4525 MVLVHPVGVGVGVGVGVCRGFLSLSVSYAAKVKPRRRFFCNASWQELAGVLLFSAIPFTAVKAIANSPLGESLRRNMEEKKKFALENSSKFNALADQAQKESFWYGENRPRWLGPISSYVYPSYLTGELPGDYGFDIAGFAKDPVALHKYFNFEILHARWAMLASLGALIPELLDLFGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHLAGSQGVVVIAICQALLMVGPEYARYCGSEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFAELKVKEIKNGRLAMIAWLGFYMQAALTGKGPVQNLLDHFSDPFHNNLLGSLNFLKVIKY* 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3366 332 Gene3D Chlorophyll a/b binding protein domain 111 323 - -
Lja5g3366 332 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 41 320 - -
Lja5g3366 332 SUPERFAMILY Chlorophyll a-b binding protein 103 322 - -
Lja5g3366 332 Pfam Chlorophyll A-B binding protein 122 297 IPR022796 -
Lja5g3366 332 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 41 320 IPR001344 GO:0009765|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja5g3366 Lja-Chr5 65765992 65776111 Dispersed/Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3366 5 65765992 65776111 Lja5g3366 5 65765992 65776111 ECH