Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3365 ATGGAGAAGAGTGGAGTAGTTTTGTCGGTGAAGGAGGCATTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTATGGGAAGGTGTATAGGGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCCCTCAAGAAGACTCGCCTCCATGAAGACGAAGAAGGTGTCCCTCCCACCACTCTCCGTGAGGTTTCCATTCTGCGAATGCTCTCTCGCGATCCCCATGTTGTCAGGTTAATGGATGTTAAACAAGGTCAGAGTAAGGAAGGGAAGACAGTGCTGTACTTGGTCTTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCACTTTCCGTCAAACTGGACAAAATGTCCCACCCAAAACCGTCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTTCTGCCATGGTCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGATCGAAAAACTAATATGCTTAAAATTGCTGATCTTGGCCTTGCTCGAGCATTCACCGTGCCAATTAAGAAGTACACGCATGAGATACTCACCCTGTGGTACAGAGCTCCTGAAGTCCTTTTGGGAGCCACCCATTACTCAATGGCAGTGGACATGTGGTCCGTTGCCTGCATCTTTGCTGAACTTGTAACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTGCAGCAACTCCTTCATATATTCAGATTGTTGGGCACTCCTAATGAAGAGGTGTGGCCAGGGGTTAGTAAACTAATGAACTGGCATGAGTATCCTCAGTGGAATCCTCAAAGTTTGTCAACTGCTGTTCCAAATTTGGATGAGCTTGGACTGGATCTACTATCTGAAATGTTGCACTATGAACCTTCCAAGAGGATCTCAGCAAAGAAAGCTATGGAACATTGTTACTTTGATGACCTGGACAAGACCTATCTTTAG 939 0.4622 MEKSGVVLSVKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQSKEGKTVLYLVFEYMDTDLKKFIRTFRQTGQNVPPKTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTNMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDMWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWNPQSLSTAVPNLDELGLDLLSEMLHYEPSKRISAKKAMEHCYFDDLDKTYL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3365 312 PANTHER - 11 310 - -
Lja5g3365 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lja5g3365 312 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
Lja5g3365 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g3365 312 PANTHER CELL DIVISION PROTEIN KINASE 11 310 - -
Lja5g3365 312 SUPERFAMILY Protein kinase-like (PK-like) 10 308 IPR011009 -
Lja5g3365 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g3365 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lja5g3365 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Lja5g3365 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3365 Lja-Chr5 65758058 65760375 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lja5g3365 Pkinase 2.4e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3365 5 65758058 65760375 Lja5g3365 5 65758058 65760375 ECH