Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3364 ATGCACCTGAGCGAGAACGAAGGAATAGAGGGCAAGACCTTGGTGGTCACGGGTGGACTCGGATTCGTAGGATCTGCTCTGTGCTTGGAACTCGTACGAAGAGGTGCTCATGAGGTGCGAGCCTTTGACCTCCGCGACTCTTCTCCTTGGTTCGCTATTCTCAAGGACAATGGAGTCCGTTGCATTCAAGGGGATATCGTTCGCAAAGAGGATGTGGAAAGCGCCCTCCGCGGTGCCGATTGTGTGTTCCACCTTGCTGCTTTTGGAATGTCAGGGAAAGAGATGCTCCAATTAACTCGTGTTGATCAAGTCAACATAACTGGGACTTGCCATGTTCTTGATGCTTGCCTACACCTTGGCATCAAAAGACTTGTCTATTGTAGCACCTACAATGTTGTCTTTGCCGGTCAACGCATAGTCAACGGAAATGAGTCCTTGCCTTATTTCCCTATTGATCACCATGTTGATCCTTATGGCCGCTCTAAATCAATTGCTGAACAGTTGGTTCTCAAGAACAATGCCCGCCCTTTCAAGAACGATGCTGGGAATTGTCTTTACACTTGTGCTGTTCGTCCAGCTGCAATCTACGGACCCGGCGAAGACAGACACCTTCCAAGGATCATAACCACGGCAAAGTTGGGTCTGCTTCTGTTCACAATTGGCGACCAAACTGTAAAATCAGATTGGGTTTTTGTAGAGAACCTTGTCCTTGCCCTTATATTGGCAAGCATGGGACTTCTGGATGACAGTGCTGGCAAGGGAAAACAACGCCCTATAGCTGCTGGCCAGGCATACTTTATATCCGATGGTTCACCTGTCAATACTTTTGAATTCCTCCAACCTCTACTCAGGAGCTTGGAATATGAACTGCCCAAAACTTCCTTAGCTGTTGACCATGCTCTTGTTCTCGGGAGGATTTGCCAGGGCGTTTATACAATCTTATATCCATGGCTTGACCGCTGGTGGCTCCCTCAGCCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGGGTGACCCACTATTTCTCTTATCTTAAAGCCAAAGAAGAGATTGGCTATGTTCCCATGGTGAGCTCGCGAGAGGGGATGGCTTCGACCATATCTTACTGGCAACAGAGGAAAATGATAACTCTAGATGGCCCTACGATCTACACGTGGTTGTTTTGTGTCATTGGAATGATCTCTCTGTTTTGTGCTGCTTTCCTACCTGACGTAGGGATTGTGTTCCTTCTCAGAGCTACGAGTCTATTTGTCTTTCGGTCAATGTGGATGATAAGGCTGGTGTTTATTCTAGCAACAGCTGCTCATGTCTTTGAGGCAATTTATGCTTGGTACCTGGCTAAAAGGGTGGATCATGCTAATGCAAGAGGCTGGTTTTGGCAAACTTTTGCTCTTGGGTATTTTTCATTGCGTTTTCTACTTAAAAGAGCAAGGAAATAA 1440 0.4701 MHLSENEGIEGKTLVVTGGLGFVGSALCLELVRRGAHEVRAFDLRDSSPWFAILKDNGVRCIQGDIVRKEDVESALRGADCVFHLAAFGMSGKEMLQLTRVDQVNITGTCHVLDACLHLGIKRLVYCSTYNVVFAGQRIVNGNESLPYFPIDHHVDPYGRSKSIAEQLVLKNNARPFKNDAGNCLYTCAVRPAAIYGPGEDRHLPRIITTAKLGLLLFTIGDQTVKSDWVFVENLVLALILASMGLLDDSAGKGKQRPIAAGQAYFISDGSPVNTFEFLQPLLRSLEYELPKTSLAVDHALVLGRICQGVYTILYPWLDRWWLPQPFILPSEVHKVGVTHYFSYLKAKEEIGYVPMVSSREGMASTISYWQQRKMITLDGPTIYTWLFCVIGMISLFCAAFLPDVGIVFLLRATSLFVFRSMWMIRLVFILATAAHVFEAIYAWYLAKRVDHANARGWFWQTFALGYFSLRFLLKRARK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3364 479 Pfam Transmembrane protein 254 388 474 IPR028110 -
Lja5g3364 479 Gene3D - 3 377 - -
Lja5g3364 479 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 9 361 - -
Lja5g3364 479 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 296 IPR002225 GO:0003854|GO:0006694|GO:0016616
Lja5g3364 479 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 361 - -
Lja5g3364 479 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 380 IPR036291 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3364 5 65754368 65756877 Lja5g3364 5 65754368 65756877 ECH
Lja5g3364 5 65754368 65756877 Lja1g3451 1 43029609 43032949 PCT