Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g3360 ATGAGTGGAAGGAACATTGACCCGAGAAGTGGCTTCTGCAGCTCCAATTCAATCTTCTACAGCAAGCGGAAGCCCCTCCCTCTCCCTCCAAACCACTCCTTAGACGTCACTACTTTCATCTCCTCCCGCTCCCACCATGGCAAGACCGCCTTCATCGACGCTGCCACTGGCCGCAAGTTCACCTACCAACACCTCTGGACCGCCGTCCACGCCGTCGCCTCCTCTCTCTCCGACATGGGCATCCGAAAGGGCAACGTCGTCCTCCTCCTTTCCCCCAACTCCATCTACTTCCCCGTCGTCTGCCTCGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCCCTCAACACCCCTCAAGAAATCGCCAAGCAGATCGCCGATTCCAACCCCGTCCTCGCCTTCACCATCCCTCCCCTGCTCCCCAAAATCACCGCCGCATCACCCTCCCTCCCAATTGTTCTCATGGATTCCGATTCACCATCTTCTTCAGGTGCCAGTGCCACCACCCTGGACCAGATGATGAAAACCGAACCCAAGGCGAATCAGATCAGGGACCGAGTTGACCAGGACGACACCGCCACGCTGCTTTACTCCTCCGGCACCACCGGACCCAGCAAAGGAGTGATCTCCTCGCACCGGAACCTCATAGCAATGGTTGAAATCGTTCAAAGCCGGTTCAGCAAGGAAGATGAACAAACCTTCATCTGCACGGTGCCCATGTTCCACATATACGGCCTCGCTGTGTTTGCGACGGGGCTGCTCATTTCGGGATCAACCATCGTGGTTCTCTCCAAATTTGAAATGCACGACATGTTTTCCACGATCGACAAGTTCCGCGCCACGTTCCTGCCGCTGGTGCCGCCGATACTGGTGGCGATGATCAACAACGCTGATGCGATTAAGGGGAAGTATGACTTGAGTTCACTGCACACGGTGCTATCAGGTGGGGCTCCGCTGAGCAAGGAGGTGACGGAGGGGTTTGTTGACAAGTACCCAAACGTCACCATCCTTCAGGGTTACGGCTTGACGGAATCCTCAGGAGTGGGGGCATCCACTGACTCCTTGGACGAGAGCCGGAGGTACGGCACGGCGGGGATGTTGTCTCCTGCCGCTGAGGCTATGGTTGTTGACCCTGAAACCGGTCGAGCGCTGGGGGTTAACCAGACCGGTGAGCTCTGGCTCCGGGGACCCACCATCATGAAAGGTTATTTCAGTAATGAGGAGGCAACCACATCAACCCTTAATTCAGAGGGATGGTTAAGAACAGGAGATATTTGCTACATTGATAATGATGGCTTTTTATTTATCGTTGATCGCCTGAAAGAGCTAATCAAATACAAGGGATATCAGGTACCTCCAGCTGAACTAGAGGCTTTGTTGCTTACTCATTCAGCTATTTTAGATGCTGCTGTTATACCGTATCCTGATAAGGAGGCTGGGCAGTTTCCAATGGCGTATGTTGTTAGGAAAGATGGAGGTAGCATATCAGAAAAACAAGTTATGGATTTTGTTGCAGAACAGGTGGCTCCGTATAAGAGAATTCGGAAAGTGGCCTTCATATCTTCCATACCAAAAAATGCATCTGGTAAAATTCTTAGGAAGGATCTAATCAAGCTCGCAACGTCTAAACTCTGA 1641 0.5289 MSGRNIDPRSGFCSSNSIFYSKRKPLPLPPNHSLDVTTFISSRSHHGKTAFIDAATGRKFTYQHLWTAVHAVASSLSDMGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTPQEIAKQIADSNPVLAFTIPPLLPKITAASPSLPIVLMDSDSPSSSGASATTLDQMMKTEPKANQIRDRVDQDDTATLLYSSGTTGPSKGVISSHRNLIAMVEIVQSRFSKEDEQTFICTVPMFHIYGLAVFATGLLISGSTIVVLSKFEMHDMFSTIDKFRATFLPLVPPILVAMINNADAIKGKYDLSSLHTVLSGGAPLSKEVTEGFVDKYPNVTILQGYGLTESSGVGASTDSLDESRRYGTAGMLSPAAEAMVVDPETGRALGVNQTGELWLRGPTIMKGYFSNEEATTSTLNSEGWLRTGDICYIDNDGFLFIVDRLKELIKYKGYQVPPAELEALLLTHSAILDAAVIPYPDKEAGQFPMAYVVRKDGGSISEKQVMDFVAEQVAPYKRIRKVAFISSIPKNASGKILRKDLIKLATSKL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g3360 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 545 - -
Lja5g3360 546 Gene3D - 444 545 IPR045851 -
Lja5g3360 546 Gene3D - 16 443 IPR042099 -
Lja5g3360 546 Pfam AMP-binding enzyme 43 448 IPR000873 -
Lja5g3360 546 SUPERFAMILY Acetyl-CoA synthetase-like 42 544 - -
Lja5g3360 546 PANTHER BNAA06G14440D PROTEIN 7 545 - -
Lja5g3360 546 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Lja5g3360 546 Pfam AMP-binding enzyme C-terminal domain 457 532 IPR025110 -
Lja5g3360 546 CDD 4CL 28 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g3360 Lja-Chr5 65705033 65708726 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g3360 5 65705033 65708726 Lja5g3360 5 65705033 65708726 ECH